Dario Boffelli
Dario Boffelli
Потвърден имейл адрес: ucsf.edu
Functional annotation of a full-length mouse cDNA collection
J Kawai, A Shinagawa, K Shibata, M Yoshino, M Itoh, Y Ishii, T Arakawa, ...
Nature 409 (6821), 685-689, 2001
Phylogenetic shadowing of primate sequences to find functional regions of the human genome
D Boffelli, J McAuliffe, D Ovcharenko, KD Lewis, I Ovcharenko, L Pachter, ...
Science 299 (5611), 1391-1394, 2003
Symbiosis insights through metagenomic analysis of a microbial consortium
T Woyke, H Teeling, NN Ivanova, M Huntemann, M Richter, FO Gloeckner, ...
Nature 443 (7114), 950-955, 2006
Selection-free genome editing of the sickle mutation in human adult hematopoietic stem/progenitor cells
MA DeWitt, W Magis, NL Bray, T Wang, JR Berman, F Urbinati, SJ Heo, ...
Science translational medicine 8 (360), 360ra134-360ra134, 2016
Comparative genomics at the vertebrate extremes
D Boffelli, MA Nobrega, EM Rubin
Nature Reviews Genetics 5 (6), 456-465, 2004
Identification of a receptor mediating absorption of dietary cholesterol in the intestine
H Hauser, JH Dyer, A Nandy, MA Vega, M Werder, E Bieliauskaite, ...
Biochemistry 37 (51), 17843-17850, 1998
Identification and correction of systematic error in high-throughput sequence data
F Meacham, D Boffelli, J Dhahbi, DIK Martin, M Singer, L Pachter
BMC bioinformatics 12 (1), 1-11, 2011
5′ tRNA halves are present as abundant complexes in serum, concentrated in blood cells, and modulated by aging and calorie restriction
JM Dhahbi, SR Spindler, H Atamna, A Yamakawa, D Boffelli, P Mote, ...
BMC genomics 14 (1), 1-14, 2013
Deep sequencing of serum small RNAs identifies patterns of 5′ tRNA half and YRNA fragment expression associated with breast cancer
JM Dhahbi, SR Spindler, H Atamna, D Boffelli, DIK Martin
Biomarkers in cancer 6, BIC. S20764, 2014
Apolipoprotein (a) gene enhancer resides within a LINE element
Z Yang, D Boffelli, N Boonmark, K Schwartz, R Lawn
Journal of Biological Chemistry 273 (2), 891-897, 1998
Genome methylation in D. melanogaster is found at specific short motifs and is independent of DNMT2 activity
S Takayama, J Dhahbi, A Roberts, G Mao, SJ Heo, L Pachter, DIK Martin, ...
Genome research 24 (5), 821-830, 2014
5′-YRNA fragments derived by processing of transcripts from specific YRNA genes and pseudogenes are abundant in human serum and plasma
JM Dhahbi, SR Spindler, H Atamna, D Boffelli, P Mote, DIK Martin
Physiological genomics 45 (21), 990-998, 2013
Deep sequencing reveals novel microRNAs and regulation of microRNA expression during cell senescence
JM Dhahbi, H Atamna, D Boffelli, W Magis, SR Spindler, DIK Martin
PloS one 6 (5), e20509, 2011
eShadow: a tool for comparing closely related sequences
I Ovcharenko, D Boffelli, GG Loots
Genome Research 14 (6), 1191-1198, 2004
Activation-induced cytidine deaminase (AID) is necessary for the epithelial–mesenchymal transition in mammary epithelial cells
DP Muñoz, EL Lee, S Takayama, JP Coppé, SJ Heo, D Boffelli, ...
Proceedings of the National Academy of Sciences 110 (32), E2977-E2986, 2013
Deep sequencing identifies circulating mouse miRNAs that are functionally implicated in manifestations of aging and responsive to calorie restriction
JM Dhahbi, SR Spindler, H Atamna, A Yamakawa, N Guerrero, D Boffelli, ...
Aging (Albany NY) 5 (2), 130, 2013
Intraspecies sequence comparisons for annotating genomes
D Boffelli, CV Weer, L Weng, KD Lewis, MI Shoukry, L Pachter, DN Keys, ...
Genome research 14 (12), 2406-2411, 2004
Absorption of monoacylglycerols by small intestinal brush border membrane
G Schulthess, G Lipka, S Compassi, D Boffelli, FE Weber, F Paltauf, ...
Biochemistry 33 (15), 4500-4508, 1994
Estrogen modulation of apolipoprotein (a) expression: identification of a regulatory element
D Boffelli, DA Zajchowski, Z Yang, RM Lawn
Journal of Biological Chemistry 274 (22), 15569-15574, 1999
Genomic interval engineering of mice identifies a novel modulator of triglyceride production
Y Zhu, MC Jong, KA Frazer, E Gong, RM Krauss, JF Cheng, D Boffelli, ...
Proceedings of the National Academy of Sciences 97 (3), 1137-1142, 2000
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Статии 1–20