Следене
Jawon Song
Jawon Song
Texas Advanced Computing Center
Потвърден имейл адрес: tacc.utexas.edu
Заглавие
Позовавания
Позовавания
Година
Epigenetic and genetic influences on DNA methylation variation in maize populations
SR Eichten, R Briskine, J Song, Q Li, R Swanson-Wagner, PJ Hermanson, ...
The Plant Cell 25 (8), 2783-2797, 2013
2432013
RNA-directed DNA methylation enforces boundaries between heterochromatin and euchromatin in the maize genome
Q Li, JI Gent, G Zynda, J Song, I Makarevitch, CD Hirsch, CN Hirsch, ...
Proceedings of the National Academy of Sciences 112 (47), 14728-14733, 2015
2082015
Genetic perturbation of the maize methylome
Q Li, SR Eichten, PJ Hermanson, VM Zaunbrecher, J Song, J Wendt, ...
The Plant Cell 26 (12), 4602-4616, 2014
1752014
Genomic distribution of H3K9me2 and DNA methylation in a maize genome
PT West, Q Li, L Ji, SR Eichten, J Song, MW Vaughn, RJ Schmitz, ...
PloS one 9 (8), e105267, 2014
1552014
Apyrase suppression raises extracellular ATP levels and induces gene expression and cell wall changes characteristic of stress responses
MH Lim, J Wu, J Yao, IF Gallardo, JW Dugger, LJ Webb, J Huang, ...
Plant Physiology 164 (4), 2054-2067, 2014
772014
Examining the causes and consequences of context-specific differential DNA methylation in maize
Q Li, J Song, PT West, G Zynda, SR Eichten, MW Vaughn, NM Springer
Plant physiology 168 (4), 1262-1274, 2015
692015
Genome-wide analysis of the Arabidopsis replication timing program
L Concia, AM Brooks, E Wheeler, GJ Zynda, EE Wear, C LeBlanc, J Song, ...
Plant physiology 176 (3), 2166-2185, 2018
382018
Subtle perturbations of the maize methylome reveal genes and transposons silenced by chromomethylase or RNA-directed DNA methylation pathways
SN Anderson, GJ Zynda, J Song, Z Han, MW Vaughn, Q Li, NM Springer
G3: Genes, Genomes, Genetics 8 (6), 1921-1932, 2018
302018
Genomic Analysis of the DNA Replication Timing Program during Mitotic S Phase in Maize (Zea mays) Root Tips
EE Wear, J Song, GJ Zynda, C LeBlanc, TJ Lee, L Mickelson-Young, ...
The Plant Cell 29 (9), 2126-2149, 2017
302017
ANN1 and ANN2 function in post-phloem sugar transport in root tips to affect primary root growth
J Wang, J Song, G Clark, SJ Roux
Plant physiology 178 (1), 390-401, 2018
272018
CpG island-mediated global gene regulatory modes in mouse embryonic stem cells
S Beck, BK Lee, C Rhee, J Song, AJ Woo, J Kim
Nature communications 5 (1), 5490, 2014
272014
Repliscan: a tool for classifying replication timing regions
GJ Zynda, J Song, L Concia, EE Wear, L Hanley-Bowdoin, WF Thompson, ...
BMC bioinformatics 18, 1-14, 2017
142017
Implications of CpG islands on chromosomal architectures and modes of global gene regulation
S Beck, C Rhee, J Song, BK Lee, L LeBlanc, L Cannon, J Kim
Nucleic Acids Research 46 (9), 4382-4391, 2018
122018
Identifier services: modeling and implementing distributed data management in cyberinfrastructure
M Esteva, RL Walls, AB Magill, W Xu, R Huang, J Carson, J Song
Data and Information Management 3 (1), 26-39, 2019
62019
Content-based comparison for collections identification
W Xu, R Huang, M Esteva, J Song, R Walls
2016 IEEE International Conference on Big Data (Big Data), 3283-3289, 2016
62016
Bisulfite sequence analyses using CyVerse discovery environment: from mapping to DMRs
J Song, G Zynda, S Beck, NM Springer, MW Vaughn
Current protocols in plant biology 1 (3), 510-529, 2016
52016
Comparing DNA replication programs reveals large timing shifts at centromeres of endocycling cells in maize roots
EE Wear, J Song, GJ Zynda, L Mickelson-Young, C LeBlanc, TJ Lee, ...
PLoS Genetics 16 (10), e1008623, 2020
32020
CyVerse: Cyberinfrastructure for open science
TL Swetnam, PB Antin, R Bartelme, A Bucksch, D Camhy, G Chism, I Choi, ...
PLOS Computational Biology 20 (2), e1011270, 2024
22024
Conserved dual-mode gene regulation programs in higher eukaryotes
JY Lee, J Song, L LeBlanc, I Davis, J Kim, S Beck
Nucleic Acids Research 49 (5), 2583-2597, 2021
22021
Early COVID-19 pandemic modeling: Three compartmental model case studies from Texas, USA
KA Pierce, E Ho, X Wang, R Pasco, Z Du, G Zynda, J Song, G Wells, ...
Computing in science & engineering 23 (1), 25-34, 2020
12020
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