Thomas E. Gorochowski
Thomas E. Gorochowski
Royal Society University Research Fellow / Associate Professor, University of Bristol
Потвърден имейл адрес: bristol.ac.uk - Начална страница
Burden-driven feedback control of gene expression
F Ceroni, A Boo, S Furini, TE Gorochowski, O Borkowski, YN Ladak, ...
Nature Methods 15 (5), 387, 2018
Synchronization and control of complex networks via contraction, adaptation and evolution
P DeLellis, M Di Bernardo, TE Gorochowski, G Russo
IEEE Circuits and Systems Magazine 10 (3), 64-82, 2010
Trade-offs between tRNA abundance and mRNA secondary structure support smoothing of translation elongation rate
TE Gorochowski, Z Ignatova, RAL Bovenberg, JA Roubos
Nucleic Acids Research 43 (6), 3022-3032, 2015
BSim: an agent-based tool for modeling bacterial populations in systems and synthetic biology
TE Gorochowski, A Matyjaszkiewicz, T Todd, N Oak, K Kowalska, S Reid, ...
PloS one 7 (8), e42790, 2012
A minimal model of ribosome allocation dynamics captures trade-offs in expression between endogenous and synthetic genes
TE Gorochowski, I Avcilar-Kucukgoze, RAL Bovenberg, JA Roubos, ...
ACS Synthetic Biology, 2016
Pathways to cellular supremacy in biocomputing
L Grozinger, M Amos, TE Gorochowski, P Carbonell, DA Oyarzún, R Stoof, ...
Nature Communications 10 (1), 1-11, 2019
Genetic circuit characterization and debugging using RNA‐seq
TE Gorochowski, A Espah Borujeni, Y Park, AAK Nielsen, J Zhang, ...
Molecular Systems Biology 13 (11), 952, 2017
Agent-based modelling in synthetic biology
TE Gorochowski
Essays in Biochemistry 60 (4), 325-336, 2016
Evolving enhanced topologies for the synchronization of dynamical complex networks
TE Gorochowski, M di Bernardo, CS Grierson
Physical Review E 81 (5), 056212, 2010
Absolute quantification of translational regulation and burden using combined sequencing approaches
TE Gorochowski, I Chelysheva, M Eriksen, P Nair, S Pedersen, Z Ignatova
Molecular Systems Biology 15 (5), e8719, 2019
DNAplotlib: programmable visualization of genetic designs and associated data
BS Der, E Glassey, BA Bartley, C Enghuus, DB Goodman, DB Gordon, ...
ACS Synthetic Biology 6 (7), 1115-1119, 2016
Memory and combinatorial logic based on DNA inversions: Dynamics and evolutionary stability
J Fernandez-Rodriguez, L Yang, TE Gorochowski, DB Gordon, CA Voigt
ACS Synthetic Biology 4 (12), 1361-1372, 2015
Organization of feed-forward loop motifs reveals architectural principles in natural and engineered networks
TE Gorochowski, CS Grierson, M di Bernardo
Science Advances 4 (3), eaap9751, 2018
Beyond contact-based transmission networks: the role of spatial coincidence
TO Richardson, TE Gorochowski
Journal of The Royal Society Interface 12 (111), 20150705, 2015
Translational sensitivity of the Escherichia coli genome to fluctuating tRNA availability
SE Wohlgemuth, TE Gorochowski, JA Roubos
Nucleic Acids Research 41 (17), 8021-8033, 2013
Registry in a tube: multiplexed pools of retrievable parts for genetic design space exploration
LBA Woodruff, TE Gorochowski, N Roehner, TS Mikkelsen, D Densmore, ...
Nucleic Acids Research 45 (3), 1553-1565, 2016
Evolving dynamical networks: a formalism for describing complex systems
TE Gorochowski, MD Bernardo, CS Grierson
Complexity 17 (3), 18-25, 2011
A standard-enabled workflow for synthetic biology
CJ Myers, J Beal, TE Gorochowski, H Kuwahara, C Madsen, ...
Biochemical Society Transactions 45 (3), 793-803, 2017
Using aging to visually uncover evolutionary processes on networks
T Gorochowski, M di Bernardo, C Grierson
Visualization and Computer Graphics, IEEE Transactions on 18 (8), 1343-1352, 2012
Using synthetic biological parts and microbioreactors to explore the protein expression characteristics of Escherichia coli
TE Gorochowski, E van den Berg, R Kerkman, JA Roubos, ...
ACS Synthetic Biology 3 (3), 129-139, 2014
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