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Gregorio Alanis-Lobato
Gregorio Alanis-Lobato
Principal Computational Biologist
Verified email at boehringer-ingelheim.com - Homepage
Title
Cited by
Cited by
Year
From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks
CV Cannistraci, G Alanis-Lobato, T Ravasi
Scientific reports 3 (1), 1613, 2013
3712013
HIPPIE v2. 0: enhancing meaningfulness and reliability of protein–protein interaction networks
G Alanis-Lobato, MA Andrade-Navarro, MH Schaefer
Nucleic acids research, gkw985, 2016
3612016
Minimum curvilinearity to enhance topological prediction of protein interactions by network embedding
CV Cannistraci, G Alanis-Lobato, T Ravasi
Bioinformatics 29 (13), i199-i209, 2013
1312013
Frequent loss of heterozygosity in CRISPR-Cas9–edited early human embryos
G Alanis-Lobato, J Zohren, A McCarthy, NME Fogarty, N Kubikova, ...
Proceedings of the National Academy of Sciences 118 (22), e2004832117, 2021
1092021
Initiation of a conserved trophectoderm program in human, cow and mouse embryos
C Gerri, A McCarthy, G Alanis-Lobato, A Demtschenko, A Bruneau, ...
Nature 587 (7834), 443-447, 2020
1062020
Efficient embedding of complex networks to hyperbolic space via their Laplacian
G Alanis-Lobato, P Mier, MA Andrade-Navarro
Scientific reports 6 (1), 1-10, 2016
672016
Highlighting nonlinear patterns in population genetics datasets
G Alanis-Lobato, CV Cannistraci, A Eriksson, A Manica, T Ravasi
Scientific reports 5 (1), 1-8, 2015
392015
Manifold learning and maximum likelihood estimation for hyperbolic network embedding
G Alanis-Lobato, P Mier, MA Andrade-Navarro
Applied network science 1 (1), 1-14, 2016
372016
IGF1-mediated human embryonic stem cell self-renewal recapitulates the embryonic niche
SE Wamaitha, KJ Grybel, G Alanis-Lobato, C Gerri, S Ogushi, A McCarthy, ...
Nature communications 11 (1), 764, 2020
342020
C ontext characterization of amino acid homorepeats using evolution, position, and order
P Mier, G Alanis‐Lobato, MA Andrade‐Navarro
Proteins: Structure, Function, and Bioinformatics 85 (4), 709-719, 2017
272017
Protein-protein interactions can be predicted using coiled coil co-evolution patterns
P Mier, G Alanis-Lobato, MA Andrade-Navarro
Journal of Theoretical Biology 412, 198-203, 2017
232017
The latent geometry of the human protein interaction network
G Alanis-Lobato, P Mier, M Andrade-Navarro
Bioinformatics 34 (16), 2826-2834, 2018
222018
Mining protein interactomes to improve their reliability and support the advancement of network medicine
G Alanis-Lobato
Frontiers in genetics 6, 296, 2015
182015
Exploitation of genetic interaction network topology for the prediction of epistatic behavior
G Alanis-Lobato, CV Cannistraci, T Ravasi
Genomics 102 (4), 202-208, 2013
182013
Interaction profiling of RNA-binding ubiquitin ligases reveals a link between posttranscriptional regulation and the ubiquitin system
A Hildebrandt, G Alanis-Lobato, A Voigt, K Zarnack, MA Andrade-Navarro, ...
Scientific reports 7 (1), 16582, 2017
162017
Evolutionary study of disorder in protein sequences
K Kastano, G Erdős, P Mier, G Alanis-Lobato, VJ Promponas, Z Dosztányi, ...
Biomolecules 10 (10), 1413, 2020
152020
Transdifferentiation of mouse embryonic fibroblasts into dopaminergic neurons reactivates LINE-1 repetitive elements
F Della Valle, MP Thimma, M Caiazzo, S Pulcrano, M Celii, SA Adroub, ...
Stem Cell Reports 14 (1), 60-74, 2020
152020
Nuclear inclusions of pathogenic ataxin-1 induce oxidative stress and perturb the protein synthesis machinery
S Laidou, G Alanis-Lobato, J Pribyl, T Raskó, B Tichy, K Mikulasek, ...
Redox Biology 32, 101458, 2020
102020
CellMap visualizes protein-protein interactions and subcellular localization
C Dallago, T Goldberg, MA Andrade-Navarro, G Alanis-Lobato, B Rost
F1000Research 6, 2017
92017
Distance distribution between complex network nodes in hyperbolic space
G Alanis-Lobato, MA Andrade-Navarro
Complex Systems 25 (3), 223-236, 2016
92016
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Articles 1–20