| Amber 2021 DA Case, HM Aktulga, K Belfon, I Ben-Shalom, SR Brozell, DS Cerutti, ... University of California, San Francisco, 2021 | 4479 | 2021 |
| Amber 2015 (University of California, San Francisco) DA Case, IY Ben-Shalom, SR Brozell, DS Cerutti, TE Cheatham III, ... Google Scholar There is no corresponding record for this reference, 2015 | 409 | 2015 |
| Recent developments and applications of the MMPBSA method C Wang, DA Greene, L Xiao, R Qi, R Luo Frontiers in molecular biosciences 4, 87, 2018 | 386 | 2018 |
| AMBER 2018; 2018 DA Case, IY Ben-Shalom, SR Brozell, DS Cerutti, TE Cheatham III, ... University of California, San Francisco, 2018 | 99 | 2018 |
| Expanding the nanoarchitectural diversity through aromatic di-and tri-peptide coassembly: Nanostructures and molecular mechanisms C Guo, ZA Arnon, R Qi, Q Zhang, L Adler-Abramovich, E Gazit, G Wei ACS nano 10 (9), 8316-8324, 2016 | 90 | 2016 |
| Amber 2016 university of California DA Case, RM Betz, DS Cerutti, TE Cheatham III, TA Darden, RE Duke, ... San Francisco, 2016 | 84 | 2016 |
| Conformational distribution and α-helix to β-sheet transition of human amylin fragment dimer R Qi, Y Luo, B Ma, R Nussinov, G Wei Biomacromolecules 15 (1), 122-131, 2014 | 78 | 2014 |
| Amber 2020: University of california DA Case, K Belfon, IY Ben-Shalom, SR Brozell, DS Cerutti, TEI Cheatham, ... San Francisco, 2020 | 73 | 2020 |
| Regulation of the Hippo pathway by phosphatidic acid-mediated lipid-protein interaction H Han, R Qi, JJ Zhou, AP Ta, B Yang, HJ Nakaoka, G Seo, KL Guan, ... Molecular cell 72 (2), 328-340. e8, 2018 | 71 | 2018 |
| Replica exchange molecular dynamics: a practical application protocol with solutions to common problems and a peptide aggregation and self-assembly example R Qi, G Wei, B Ma, R Nussinov Peptide self-assembly: Methods and protocols, 101-119, 2018 | 66 | 2018 |
| Aβ “stretching-and-packing” cross-seeding mechanism can trigger tau protein aggregation R Qi, Y Luo, G Wei, R Nussinov, B Ma The Journal of Physical Chemistry Letters 6 (16), 3276-3282, 2015 | 47 | 2015 |
| AMBER 2018 TA Darden, RE Duke, D Ghoreishi, MK Gilson, H Gohlke, AW Goetz, ... University of California, San Francisco, 2018 | 44 | 2018 |
| Self-aggregation and coaggregation of the p53 core fragment with its aggregation gatekeeper variant J Lei, R Qi, G Wei, R Nussinov, B Ma Physical Chemistry Chemical Physics 18 (11), 8098-8107, 2016 | 28 | 2016 |
| Conformational stability and dynamics of the cancer-associated isoform Δ133p53β are modulated by p53 peptides and p53-specific DNA J Lei, R Qi, Y Tang, W Wang, G Wei, R Nussinov, B Ma The FASEB Journal 33 (3), 4225, 2019 | 27 | 2019 |
| Amber 2020, 2020 DA Case, K Belfon, IY Ben-Shalom, SR Brozell, DS Cerutti, T Cheatham, ... Google Scholar There is no corresponding record for this reference, 2019 | 27 | 2019 |
| Amber 16 and AmberTools17 DA Case, DS Cerutti, TE Cheatham, TA Darden, RE Duke, TJ Giese, ... University of California, San Francisco, 2017 | 26 | 2017 |
| Heterogeneous dielectric implicit membrane model for the calculation of MMPBSA binding free energies DA Greene, R Qi, R Nguyen, T Qiu, R Luo Journal of chemical information and modeling 59 (6), 3041-3056, 2019 | 25 | 2019 |
| Interaction Dynamics in inhibiting the aggregation of Aβ peptides by SWCNTs: a combined experimental and coarse-grained molecular dynamic simulation study D Lin, R Qi, S Li, R He, P Li, G Wei, X Yang ACS Chemical Neuroscience 7 (9), 1232-1240, 2016 | 24 | 2016 |
| Conformational dynamics of cancer-associated MyD88-TIR domain mutant L252P (L265P) allosterically tilts the landscape toward homo-dimerization C Zhan, R Qi, G Wei, E Guven-Maiorov, R Nussinov, B Ma Protein Engineering, Design and Selection 29 (9), 347-354, 2016 | 21 | 2016 |
| Efficient formulation of polarizable Gaussian multipole electrostatics for biomolecular simulations H Wei, R Qi, J Wang, P Cieplak, Y Duan, R Luo The Journal of chemical physics 153 (11), 2020 | 19 | 2020 |
Guanghong WeiDepartment of Physics, Fudan UniversityVerified email at fudan.edu.cn
