Junichi Tsujii
Junichi Tsujii
Artificial Intelligence Research Center, AIST
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Cited by
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GENIA corpus—a semantically annotated corpus for bio-textmining
JD Kim, T Ohta, Y Tateisi, J Tsujii
Bioinformatics 19 (suppl_1), i180-i182, 2003
BRAT: a web-based tool for NLP-assisted text annotation
P Stenetorp, S Pyysalo, G Topić, T Ohta, S Ananiadou, J Tsujii
Proceedings of the Demonstrations at the 13th Conference of the European …, 2012
Overview of BioNLP’09 shared task on event extraction
JD Kim, T Ohta, S Pyysalo, Y Kano, J Tsujii
Proceedings of the BioNLP 2009 workshop companion volume for shared task, 1-9, 2009
Developing a robust part-of-speech tagger for biomedical text
Y Tsuruoka, Y Tateishi, JD Kim, T Ohta, J McNaught, S Ananiadou, ...
Panhellenic conference on informatics, 382-392, 2005
Corpus annotation for mining biomedical events from literature
JD Kim, T Ohta, J Tsujii
BMC bioinformatics 9 (1), 1-25, 2008
Text mining and its potential applications in systems biology
S Ananiadou, DB Kell, J Tsujii
Trends in biotechnology 24 (12), 571-579, 2006
Accomplishments and challenges in literature data mining for biology
L Hirschman, JC Park, J Tsujii, L Wong, CH Wu
Bioinformatics 18 (12), 1553-1561, 2002
The GENIA corpus: An annotated research abstract corpus in molecular biology domain
T Ohta, Y Tateisi, JD Kim, H Mima, J Tsujii
Proceedings of the human language technology conference, 73-77, 2002
Extracting the names of genes and gene products with a hidden Markov model
N Collier, C Nobata, J Tsujii
COLING 2000 Volume 1: The 18th International Conference on Computational …, 2000
Tuning support vector machines for biomedical named entity recognition
T Makino, Y Ohta, J Tsujii
Proceedings of the ACL-02 workshop on Natural language processing in the …, 2002
Event extraction from biomedical papers using a full parser
A Yakushiji, Y Tateisi, Y Miyao, J Tsujii
Biocomputing 2001, 408-419, 2000
Bidirectional inference with the easiest-first strategy for tagging sequence data
Y Tsuruoka, J Tsujii
proceedings of human language technology conference and conference on …, 2005
Probabilistic CFG with latent annotations
T Matsuzaki, Y Miyao, J Tsujii
Proceedings of the 43rd Annual Meeting of the Association for Computational …, 2005
Identifying the interaction between genes and gene products based on frequently seen verbs in Medline abstracts
T Sekimizu, HS Park, J Tsujii
Genome informatics 9, 62-71, 1998
Dependency `arsing and Domain Adaptation with LR Models and Parser Ensembles
K Sagae, J Tsujii
EMNLP-CoNLL 2007, 1044-1050, 2007
Stochastic gradient descent training for l1-regularized log-linear models with cumulative penalty
Y Tsuruoka, J Tsujii, S Ananiadou
Proceedings of the Joint Conference of the 47th Annual Meeting of the ACL …, 2009
Feature forest models for probabilistic HPSG parsing
Y Miyao, J Tsujii
Computational linguistics 34 (1), 35-80, 2008
The C-value/NC-value Method of Automatic Recognition for Multi-word Terms
KT Frantzi, S Ananiadou, J Tsujii
International conference on theory and practice of digital libraries, 585-604, 1998
Event extraction for systems biology by text mining the literature
S Ananiadou, S Pyysalo, J Tsujii, DB Kell
Trends in biotechnology 28 (7), 381-390, 2010
Extraction of gene-disease relations from Medline using domain dictionaries and machine learning
HW Chun, Y Tsuruoka, JD Kim, R Shiba, N Nagata, T Hishiki, J Tsujii
Biocomputing 2006, 4-15, 2006
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