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Junichi Tsujii
Junichi Tsujii
Artificial Intelligence Research Center, AIST
Verified email at aist.go.jp
Title
Cited by
Cited by
Year
GENIA corpus—a semantically annotated corpus for bio-textmining
JD Kim, T Ohta, Y Tateisi, J Tsujii
Bioinformatics 19 (suppl_1), i180-i182, 2003
13522003
BRAT: a web-based tool for NLP-assisted text annotation
P Stenetorp, S Pyysalo, G Topić, T Ohta, S Ananiadou, J Tsujii
Proceedings of the Demonstrations at the 13th Conference of the European …, 2012
12542012
Overview of BioNLP’09 shared task on event extraction
JD Kim, T Ohta, S Pyysalo, Y Kano, J Tsujii
Proceedings of the BioNLP 2009 workshop companion volume for shared task, 1-9, 2009
7672009
Developing a robust part-of-speech tagger for biomedical text
Y Tsuruoka, Y Tateishi, JD Kim, T Ohta, J McNaught, S Ananiadou, ...
Panhellenic conference on informatics, 382-392, 2005
6222005
Corpus annotation for mining biomedical events from literature
JD Kim, T Ohta, J Tsujii
BMC bioinformatics 9 (1), 1-25, 2008
4552008
Text mining and its potential applications in systems biology
S Ananiadou, DB Kell, J Tsujii
Trends in biotechnology 24 (12), 571-579, 2006
4152006
Accomplishments and challenges in literature data mining for biology
L Hirschman, JC Park, J Tsujii, L Wong, CH Wu
Bioinformatics 18 (12), 1553-1561, 2002
3962002
The GENIA corpus: An annotated research abstract corpus in molecular biology domain
T Ohta, Y Tateisi, JD Kim, H Mima, J Tsujii
Proceedings of the human language technology conference, 73-77, 2002
3812002
Extracting the names of genes and gene products with a hidden Markov model
N Collier, C Nobata, J Tsujii
COLING 2000 Volume 1: The 18th International Conference on Computational …, 2000
3722000
Tuning support vector machines for biomedical named entity recognition
T Makino, Y Ohta, J Tsujii
Proceedings of the ACL-02 workshop on Natural language processing in the …, 2002
3632002
Event extraction from biomedical papers using a full parser
A Yakushiji, Y Tateisi, Y Miyao, J Tsujii
Biocomputing 2001, 408-419, 2000
3222000
Bidirectional inference with the easiest-first strategy for tagging sequence data
Y Tsuruoka, J Tsujii
proceedings of human language technology conference and conference on …, 2005
3212005
Probabilistic CFG with latent annotations
T Matsuzaki, Y Miyao, J Tsujii
Proceedings of the 43rd Annual Meeting of the Association for Computational …, 2005
3152005
Identifying the interaction between genes and gene products based on frequently seen verbs in Medline abstracts
T Sekimizu, HS Park, J Tsujii
Genome informatics 9, 62-71, 1998
3091998
Dependency `arsing and Domain Adaptation with LR Models and Parser Ensembles
K Sagae, J Tsujii
EMNLP-CoNLL 2007, 1044-1050, 2007
299*2007
Stochastic gradient descent training for l1-regularized log-linear models with cumulative penalty
Y Tsuruoka, J Tsujii, S Ananiadou
Proceedings of the Joint Conference of the 47th Annual Meeting of the ACL …, 2009
2862009
Feature forest models for probabilistic HPSG parsing
Y Miyao, J Tsujii
Computational linguistics 34 (1), 35-80, 2008
2732008
The C-value/NC-value Method of Automatic Recognition for Multi-word Terms
KT Frantzi, S Ananiadou, J Tsujii
International conference on theory and practice of digital libraries, 585-604, 1998
2691998
Event extraction for systems biology by text mining the literature
S Ananiadou, S Pyysalo, J Tsujii, DB Kell
Trends in biotechnology 28 (7), 381-390, 2010
2592010
Extraction of gene-disease relations from Medline using domain dictionaries and machine learning
HW Chun, Y Tsuruoka, JD Kim, R Shiba, N Nagata, T Hishiki, J Tsujii
Biocomputing 2006, 4-15, 2006
2142006
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