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Matthew Douglas Johnston
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Year
Stochastic analysis of biochemical reaction networks with absolute concentration robustness
DF Anderson, GA Enciso, MD Johnston
Journal of The Royal Society Interface 11 (93), 20130943, 2014
752014
Dynamics of vaccination strategies via projected dynamical systems
MG Cojocaru, CT Bauch, MD Johnston
Bulletin of mathematical biology 69, 1453-1476, 2007
652007
Linear conjugacy of chemical reaction networks
MD Johnston, D Siegel
Journal of mathematical chemistry 49, 1263-1282, 2011
602011
Computing weakly reversible linearly conjugate chemical reaction networks with minimal deficiency
MD Johnston, D Siegel, G Szederkényi
Mathematical biosciences 241 (1), 88-98, 2013
562013
Translated chemical reaction networks
MD Johnston
Bulletin of mathematical biology 76, 1081-1116, 2014
532014
A linear programming approach to weak reversibility and linear conjugacy of chemical reaction networks
MD Johnston, D Siegel, G Szederkényi
Journal of Mathematical Chemistry 50, 274-288, 2012
462012
Dynamical equivalence and linear conjugacy of chemical reaction networks: new results and methods
MD Johnston, D Siegel, G Szederkényi
arXiv preprint arXiv:1111.1441, 2011
322011
A dynamical framework for modeling fear of infection and frustration with social distancing in COVID-19 spread
MD Johnston, B Pell
arXiv preprint arXiv:2008.06023, 2020
312020
A deficiency-based approach to parametrizing positive equilibria of biochemical reaction systems
MD Johnston, S Müller, C Pantea
Bulletin of Mathematical Biology 81, 1143-1172, 2019
282019
Realizations of kinetic differential equations
G Craciun, MD Johnston, G Szederkényi, E Tonello, J Tóth, PY Yu
arXiv preprint arXiv:1907.07266, 2019
222019
Conditions for extinction events in chemical reaction networks with discrete state spaces
MD Johnston, DF Anderson, G Craciun, R Brijder
Journal of mathematical biology 76, 1535-1558, 2018
192018
Network translation and steady-state properties of chemical reaction systems
E Tonello, MD Johnston
Bulletin of Mathematical Biology 80, 2306-2337, 2018
182018
A computational approach to steady state correspondence of regular and generalized mass action systems
MD Johnston
Bulletin of mathematical biology 77, 1065-1100, 2015
172015
A computational approach to persistence, permanence, and endotacticity of biochemical reaction systems
MD Johnston, C Pantea, P Donnell
Journal of mathematical biology 72, 467-498, 2016
162016
Weak dynamical nonemptiability and persistence of chemical kinetics systems
MD Johnston, D Siegel
SIAM Journal on Applied Mathematics 71 (4), 1263-1279, 2011
142011
On classes of reaction networks and their associated polynomial dynamical systems
DF Anderson, JD Brunner, G Craciun, MD Johnston
Journal of Mathematical Chemistry 58, 1895-1925, 2020
132020
Computing weakly reversible deficiency zero network translations using elementary flux modes
MD Johnston, E Burton
Bulletin of Mathematical Biology 81, 1613-1644, 2019
132019
A framework for deriving analytic steady states of biochemical reaction networks
BS Hernandez, PVN Lubenia, MD Johnston, JK Kim
PLoS computational biology 19 (4), e1011039, 2023
122023
A computational approach to extinction events in chemical reaction networks with discrete state spaces
MD Johnston
Mathematical Biosciences 294, 130-142, 2017
102017
A stratum approach to global stability of complex balanced systems
D Siegel, MD Johnston
Dynamical Systems 26 (2), 125-146, 2011
102011
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