| Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma CP Kubicek, A Herrera-Estrella, V Seidl-Seiboth, DA Martinez, ... Genome biology 12, 1-15, 2011 | 801 | 2011 |
| Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi RA Ohm, N Feau, B Henrissat, CL Schoch, BA Horwitz, KW Barry, ... PLoS pathogens 8 (12), e1003037, 2012 | 642 | 2012 |
| RBPmap: a web server for mapping binding sites of RNA-binding proteins I Paz, I Kosti, M Ares Jr, M Cline, Y Mandel-Gutfreund Nucleic acids research 42 (W1), W361-W367, 2014 | 532 | 2014 |
| Comparative Genome Analysis of Trichophyton rubrum and Related Dermatophytes Reveals Candidate Genes Involved in Infection DA Martinez, BG Oliver, Y Grńser, JM Goldberg, W Li, NM Martinez-Rossi, ... MBio 3 (5), 10.1128/mbio. 00259-12, 2012 | 239 | 2012 |
| Cross-tissue analysis of gene and protein expression in normal and cancer tissues I Kosti, N Jain, D Aran, AJ Butte, M Sirota Scientific reports 6 (1), 24799, 2016 | 212 | 2016 |
| SFmap: a web server for motif analysis and prediction of splicing factor binding sites I Paz, M Akerman, I Dror, I Kosti, Y Mandel-Gutfreund Nucleic acids research 38 (suppl_2), W281-W285, 2010 | 112 | 2010 |
| Experimental and real-world evidence supporting the computational repurposing of bumetanide for APOE4-related Alzheimer’s disease A Taubes, P Nova, KA Zalocusky, I Kosti, M Bicak, MY Zilberter, Y Hao, ... Nature Aging 1 (10), 932-947, 2021 | 85 | 2021 |
| Characterization of Coding Synonymous and Non-Synonymous Variants in ADAMTS13 Using Ex Vivo and In Silico Approaches NC Edwards, ZA Hing, A Perry, A Blaisdell, DB Kopelman, R Fathke, ... Plos one 7 (6), e38864, 2012 | 84 | 2012 |
| Meta-analysis of vaginal microbiome data provides new insights into preterm birth I Kosti, S Lyalina, KS Pollard, AJ Butte, M Sirota Frontiers in Microbiology 11, 476, 2020 | 72 | 2020 |
| A diverse epigenetic landscape at human exons with implication for expression M Singer, I Kosti, L Pachter, Y Mandel-Gutfreund Nucleic acids research 43 (7), 3498-3508, 2015 | 69 | 2015 |
| Myofibril breakdown during atrophy is a delayed response requiring the transcription factor PAX4 and desmin depolymerization A Volodin, I Kosti, AL Goldberg, S Cohen Proceedings of the National Academy of Sciences 114 (8), E1375-E1384, 2017 | 68 | 2017 |
| Comparative analysis of fungal protein kinases and associated domains I Kosti, Y Mandel-Gutfreund, F Glaser, BA Horwitz BMC genomics 11, 1-12, 2010 | 57 | 2010 |
| The hnRNP F/H homologue of Trypanosoma brucei is differentially expressed in the two life cycle stages of the parasite and regulates splicing and mRNA stability SK Gupta, I Kosti, G Plaut, A Pivko, ID Tkacz, S Cohen-Chalamish, ... Nucleic acids research 41 (13), 6577-6594, 2013 | 53 | 2013 |
| Meta-analysis of maternal and fetal transcriptomic data elucidates the role of adaptive and innate immunity in preterm birth B Vora, A Wang, I Kosti, H Huang, I Paranjpe, TJ Woodruff, T MacKenzie, ... Frontiers in immunology 9, 993, 2018 | 46 | 2018 |
| Transcriptomics-based drug repositioning pipeline identifies therapeutic candidates for COVID-19 BL Le, G Andreoletti, T Oskotsky, A Vallejo-Gracia, R Rosales, K Yu, ... Scientific reports 11 (1), 12310, 2021 | 45 | 2021 |
| ARTS, the unusual septin: structural and functional aspects Y Mandel-Gutfreund, I Kosti, S Larisch Walter de Gruyter 392 (8-9), 783-790, 2011 | 34 | 2011 |
| Global transcriptome analysis of RNA abundance regulation by ADAR in lung adenocarcinoma MF Sharpnack, B Chen, D Aran, I Kosti, DD Sharpnack, DP Carbone, ... EBioMedicine 27, 167-175, 2018 | 29 | 2018 |
| Whole-tissue deconvolution and scRNAseq analysis identify altered endometrial cellular compositions and functionality associated with endometriosis DG Bunis, W Wang, J Vallvé-Juanico, S Houshdaran, S Sen, ... Frontiers in Immunology 12, 788315, 2022 | 26 | 2022 |
| Decreased mortality rate among COVID-19 patients prescribed statins: data from electronic health records in the US I Marić, T Oskotsky, I Kosti, B Le, RJ Wong, GM Shaw, M Sirota, ... Frontiers in medicine 8, 639804, 2021 | 26 | 2021 |
| Dense phenotyping from electronic health records enables machine learning-based prediction of preterm birth A Abraham, B Le, I Kosti, P Straub, DR Velez-Edwards, LK Davis, ... BMC medicine 20 (1), 333, 2022 | 25 | 2022 |
Marina SirotaProfessor, Acting Director, Bakar Computational Health Sciences Institute, UCSFVerified email at ucsf.edu
