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Xuhua Li
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The distinct structural preferences of tau protein repeat domains
X Li, X Dong, G Wei, M Margittai, R Nussinov, B Ma
Chemical communications 54 (45), 5700-5703, 2018
302018
A Comprehensive Insight into the Mechanisms of Dopamine in Disrupting Aβ Protofibrils and Inhibiting Aβ Aggregation
Y Chen, X Li, C Zhan, Z Lao, F Li, X Dong, G Wei
ACS Neuroscience 12 (21), 4007–4019, 2021
222021
Common cancer mutations R175H and R273H drive the p53 DNA-binding domain towards aggregation-prone conformations
L Li, X Li, Y Tang, Z Lao, J Lei, G Wei
Physical Chemistry Chemical Physics 22 (17), 9225-9232, 2020
192020
Mechanistic Insights into the Co-Aggregation of Aβ and hIAPP: An All-Atom Molecular Dynamic Study
X Li, Z Lao, Y Zou, X Dong, L Li, G Wei
The Journal of Physical Chemistry B 125 (8), 2050−2060, 2021
182021
Heparin remodels the microtubule-binding repeat R3 of Tau protein towards fibril-prone conformations
X Dong, R Qi, Q Qiao, X Li, F Li, J Wan, Q Zhang, G Wei
Physical Chemistry Chemical Physics 23 (36), 20406-20418, 2021
162021
Mechanistic insight into E22Q-mutation-induced antiparallel-to-parallel β-sheet transition of Aβ 16− 22 fibrils: an all-atom simulation study
X Li, J Lei, R Qi, L Xie, G Wei
Physical Chemistry Chemical Physics 21 (28), 15686-15694, 2019
142019
EGCG attenuates α-synuclein protofibril-membrane interactions and disrupts the protofibril
Z Yang, Y Yao, Y Zhou, X Li, Y Tang, G Wei
International Journal of Biological Macromolecules 230, 123194, 2023
92023
Recognition between CD147 and cyclophilin A deciphered by accelerated molecular dynamics simulations
Z Yang, Y Zang, H Wang, Y Kang, J Zhang, X Li, L Zhang, S Zhang
Physical Chemistry Chemical Physics 24 (31), 18905-18914, 2022
92022
ALS-associated A315E and A315pT variants exhibit distinct mechanisms in inducing irreversible aggregation of TDP-43 312–317 peptides
X Liu, Z Lao, X Li, X Dong, G Wei
Physical Chemistry Chemical Physics 24 (26), 16263-16273, 2022
52022
Molecular insights into the binding variance of SARS-CoV-2 spike with human, cat and dog ACE2 proteins
Y Zang, X Li, Y Zhao, H Wang, D Hao, L Zhang, Z Yang, X Yuan, S Zhang
Physical Chemistry Chemical Physics 23 (24), 13752-13759, 2021
52021
Dissecting the Molecular Mechanisms of the Co-Aggregation of Aβ40 and Aβ42 Peptides: A REMD Simulation Study
Xuhua Li, Zhiwei Yang, Yujie Chen, Shengli Zhang, Guanghong Wei, Lei Zhang
The Journal of Physical Chemistry B 127, 4050-4060, 2023
32023
p38α Kinase Auto-Activation through Its Conformational Transition Induced by Tyr323 Phosphorylation
Y Zang, H Wang, D Hao, Y Kang, J Zhang, X Li, L Zhang, Z Yang, ...
Journal of Chemical Information and Modeling 62 (24), 6639-6648, 2022
32022
Deciphering the mechanisms of HPV E6 mutations in the destabilization of E6/E6AP/p53 complex
L Li, X Dong, Y Tang, Z Lao, X Li, J Lei, G Wei
Biophysical Journal, 2022
32022
ALS-Linked A315T and A315E Mutations Enhance β-Barrel Formation of the TDP-43307–319 Hexamer: A REST2 Simulation Study
X Liu, X Li, Q Qiao, F Li, G Wei
ACS Chemical Neuroscience 14 (7), 1310-1320, 2023
12023
Molecular Insights into the Inhibition Mechanism of Harringtonine against Essential Proteins associated with SARS-CoV-2 Entry
Zhiwei Yang, Xinyue Fu, Yizhen Zhao, Xuhua Li, Jiangang Long, Lei Zhang
International Journal of Biological Macromolecules 240, 124352, 2023
12023
Molecular and thermodynamic insights into interfacial interactions between collagen and cellulose investigated by molecular dynamics simulation and umbrella sampling
H Ma, Q Shi, X Li, J Ren, Y Wang, Z Li, L Ning
Journal of Computer-Aided Molecular Design 37 (1), 39-51, 2023
12023
TAB1 binding induced p38α conformation change: an accelerated molecular dynamics simulation study
SZ Yongjian Zang, He Wang , Ying Kang , Jianwen Zhang , Xuhua Li , Lei Zhang ...
Physical Chemistry Chemical Physics 24, 10506-10513, 2022
12022
Structural insights into the co-aggregation of Aβ and tau amyloid core peptides: Revealing potential pathological heterooligomers by simulations
Xuhua Li, Yujie Chen, Zhiwei Yang, Shengli Zhang, Guanghong Wei, Lei Zhang
International Journal of Biological Macromolecules 254, 2024
2024
Organelle Interaction and Drug Discovery: Towards Correlative Nanoscopy and Molecular Dynamics Simulation
Zhiwei Yang, Zichen Zhang, Yizhen Zhao, Qiushi Ye, Xuhua Li, Lingjie Meng ...
the journal Frontiers in Pharmacology, 2374, 2022
2022
Accounting conformational dynamics into structural modeling reflected by Cryo-EM with deep learning
Q Ye, Y Zhao, X Li, Y Zhao, X Fu, S Zhang, Y Zhiwei, Z Lei
Combinatorial Chemistry & High Throughput Screening, 2022
2022
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