| HIPPIE: Integrating protein interaction networks with experiment based quality scores MH Schaefer, JF Fontaine, A Vinayagam, P Porras, EE Wanker, ... PloS one 7 (2), e31826, 2012 | 368 | 2012 |
| Aversion to nicotine is regulated by the balanced activity of β4 and α5 nicotinic receptor subunits in the medial habenula S Frahm, MA Ślimak, L Ferrarese, J Santos-Torres, B Antolin-Fontes, ... Neuron 70 (3), 522-535, 2011 | 305 | 2011 |
| MedlineRanker: flexible ranking of biomedical literature JF Fontaine, A Barbosa-Silva, M Schaefer, MR Huska, EM Muro, ... Nucleic acids research 37 (suppl_2), W141-W146, 2009 | 287 | 2009 |
| The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text M Krallinger, M Vazquez, F Leitner, D Salgado, A Chatr-aryamontri, ... BMC bioinformatics 12 (8), S3, 2011 | 179 | 2011 |
| CXCL5 limits macrophage foam cell formation in atherosclerosis A Rousselle, F Qadri, L Leukel, R Yilmaz, JF Fontaine, G Sihn, M Bader, ... The Journal of clinical investigation 123 (3), 1343-1347, 2013 | 108 | 2013 |
| Adding protein context to the human protein-protein interaction network to reveal meaningful interactions MH Schaefer, TJS Lopes, N Mah, JE Shoemaker, Y Matsuoka, ... PLoS computational biology 9 (1), e1002860, 2013 | 94 | 2013 |
| Génie: literature-based gene prioritization at multi genomic scale JF Fontaine, F Priller, A Barbosa-Silva, MA Andrade-Navarro Nucleic Acids Research 39 (suppl 2), W455, 2011 | 89 | 2011 |
| Mutually exclusive signaling signatures define the hepatic and pancreatic progenitor cell lineage divergence E Rodríguez-Seguel, N Mah, H Naumann, IM Pongrac, N Cerdá-Esteban, ... Genes & development 27 (17), 1932-1946, 2013 | 84 | 2013 |
| PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries A Barbosa-Silva, JF Fontaine, ER Donnard, F Stussi, JM Ortega, ... BMC bioinformatics 12, 1-9, 2011 | 69 | 2011 |
| Tissue-specific subnetworks and characteristics of publicly available human protein interaction databases TJS Lopes, M Schaefer, J Shoemaker, Y Matsuoka, J Fontaine, ... Bioinformatics 27 (17), 2414-2421, 2011 | 68 | 2011 |
| The ERPIN server: an interface to profile-based RNA motif identification A Lambert, JF Fontaine, M Legendre, F Leclerc, E Permal, F Major, ... Nucleic Acids Research 32 (suppl_2), W160-W165, 2004 | 65 | 2004 |
| Increasing the number of thyroid lesions classes in microarray analysis improves the relevance of diagnostic markers JF Fontaine, D Mirebeau-Prunier, M Raharijaona, B Franc, S Triau, ... PLoS One 4 (10), e7632, 2009 | 56 | 2009 |
| Death-associated protein 3 is overexpressed in human thyroid oncocytic tumours C Jacques, JF Fontaine, B Franc, D Mirebeau-Prunier, S Triau, ... British Journal of Cancer 101 (1), 132-138, 2009 | 54 | 2009 |
| Estrogen-related receptor alpha modulates lactate dehydrogenase activity in thyroid tumors D Mirebeau-Prunier, S Le Pennec, C Jacques, JF Fontaine, N Gueguen, ... PloS one 8 (3), e58683, 2013 | 50 | 2013 |
| Interactome mapping provides a network of neurodegenerative disease proteins and uncovers widespread protein aggregation in affected brains C Haenig, N Atias, AK Taylor, A Mazza, MH Schaefer, J Russ, ... Cell reports 32 (7), 108050, 2020 | 44 | 2020 |
| Laitor-literature assistant for identification of terms co-occurrences and relationships A Barbosa-Silva, TG Soldatos, ILF Magalhães, GA Pavlopoulos, ... BMC bioinformatics 11, 1-10, 2010 | 44 | 2010 |
| A roadmap of constitutive NF-κB activity in Hodgkin lymphoma: Dominant roles of p50 and p52 revealed by genome-wide analyses KAP de Oliveira, E Kaergel, M Heinig, JF Fontaine, G Patone, EM Muro, ... Genome Medicine 8 (1), 1-16, 2016 | 41 | 2016 |
| Microarray analysis refines classification of non-medullary thyroid tumours of uncertain malignancy JF Fontaine, D Mirebeau-Prunier, B Franc, S Triau, P Rodien, R Houlgatte, ... Oncogene 27 (15), 2228-2236, 2007 | 39 | 2007 |
| DNA microarray and miRNA analyses reinforce the classification of follicular thyroid tumors C Jacques, D Guillotin, JF Fontaine, B Franc, D Mirebeau-Prunier, ... The Journal of Clinical Endocrinology & Metabolism 98 (5), E981-E989, 2013 | 37 | 2013 |
| METHODS FOR THE PROGNOSIS OR FOR THE DIAGNOSIS OF A THYROID DISEASE R Houlgatte, F Nee, M Brigitte, J Fontaine, Y Malthiery, F Savagner EP Patent 2,132,329, 2009 | 34 | 2009 |
Miguel AndradeJohannes-Gutenberg University in MainzVerified email at uni-mainz.de
