| The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color JC Motamayor, K Mockaitis, J Schmutz, N Haiminen, DL Iii, O Cornejo, ... Genome biology 14, 1-25, 2013 | 297 | 2013 |
| Identification of Pol IV and RDR2-dependent precursors of 24 nt siRNAs guiding de novo DNA methylation in Arabidopsis T Blevins, R Podicheti, V Mishra, M Marasco, J Wang, D Rusch, H Tang, ... elife 4, e09591, 2015 | 258 | 2015 |
| Camelina seed transcriptome: a tool for meal and oil improvement and translational research HT Nguyen, JE Silva, R Podicheti, J Macrander, W Yang, TJ Nazarenus, ... Plant biotechnology journal 11 (6), 759-769, 2013 | 218 | 2013 |
| Plant extracellular vesicles contain diverse small RNA species and are enriched in 10-to 17-nucleotide “tiny” RNAs P Baldrich, BD Rutter, HZ Karimi, R Podicheti, BC Meyers, RW Innes The Plant Cell 31 (2), 315-324, 2019 | 209 | 2019 |
| Differential accumulation of retroelements and diversification of NB-LRR disease resistance genes in duplicated regions following polyploidy in the ancestor of soybean RW Innes, C Ameline-Torregrosa, T Ashfield, E Cannon, SB Cannon, ... Plant Physiology 148 (4), 1740-1759, 2008 | 142 | 2008 |
| Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors L Orsini, D Gilbert, R Podicheti, M Jansen, JB Brown, OS Solari, ... Scientific data 3 (1), 1-16, 2016 | 130 | 2016 |
| An Ergatis-based prokaryotic genome annotation web server C Hemmerich, A Buechlein, R Podicheti, KV Revanna, Q Dong Bioinformatics 26 (8), 1122-1124, 2010 | 128 | 2010 |
| A two-step process for epigenetic inheritance in Arabidopsis T Blevins, F Pontvianne, R Cocklin, R Podicheti, C Chandrasekhara, ... Molecular cell 54 (1), 30-42, 2014 | 109 | 2014 |
| Oil biosynthesis in a basal angiosperm: transcriptome analysis of Persea Americana mesocarp A Kilaru, X Cao, PB Dabbs, HJ Sung, MM Rahman, N Thrower, G Zynda, ... BMC Plant Biology 15, 1-19, 2015 | 97 | 2015 |
| Evolution of a Complex Disease Resistance Gene Cluster in Diploid Phaseolus and Tetraploid Glycine T Ashfield, AN Egan, BE Pfeil, NWG Chen, R Podicheti, MB Ratnaparkhe, ... Plant physiology 159 (1), 336-354, 2012 | 73 | 2012 |
| Stilbenoid prenyltransferases define key steps in the diversification of peanut phytoalexins T Yang, L Fang, S Sanders, S Jayanthi, G Rajan, R Podicheti, ... Journal of Biological Chemistry 293 (1), 28-46, 2018 | 53 | 2018 |
| Mismatch repair proteins initiate epigenetic alterations during inflammation-driven tumorigenesis AR Maiuri, M Peng, R Podicheti, S Sriramkumar, CM Kamplain, DB Rusch, ... Cancer research 77 (13), 3467-3478, 2017 | 52 | 2017 |
| Early transcriptional response pathways in Daphnia magna are coordinated in networks of crustacean‐specific genes L Orsini, JB Brown, O Shams Solari, D Li, S He, R Podicheti, MH Stoiber, ... Molecular ecology 27 (4), 886-897, 2018 | 48 | 2018 |
| Bacterial-Driven Inflammation and Mutant BRAF Expression Combine to Promote Murine Colon Tumorigenesis That Is Sensitive to Immune Checkpoint Therapy CE DeStefano Shields, JR White, L Chung, A Wenzel, JL Hicks, AJ Tam, ... Cancer discovery 11 (7), 1792-1807, 2021 | 47 | 2021 |
| Replication of nonautonomous retroelements in soybean appears to be both recent and common A Wawrzynski, T Ashfield, NWG Chen, J Mammadov, A Nguyen, ... Plant Physiology 148 (4), 1760-1771, 2008 | 47 | 2008 |
| De novo transcriptome sequencing in a songbird, the dark-eyed junco (Junco hyemalis): genomic tools for an ecological model system MP Peterson, DJ Whittaker, S Ambreth, S Sureshchandra, A Buechlein, ... BMC genomics 13, 1-11, 2012 | 42 | 2012 |
| Evolutionary Relationship of Disease Resistance Genes in Soybean and Arabidopsis Specific for the Pseudomonas syringae Effectors AvrB and AvrRpm1 T Ashfield, T Redditt, A Russell, R Kessens, N Rodibaugh, L Galloway, ... Plant physiology 166 (1), 235-251, 2014 | 41 | 2014 |
| The zinc-finger protein SOP1 is required for a subset of the nuclear exosome functions in Arabidopsis K Hématy, Y Bellec, R Podicheti, N Bouteiller, P Anne, C Morineau, ... PLoS Genetics 12 (2), e1005817, 2016 | 36 | 2016 |
| Diversity in Natural Transformation Frequencies and Regulation across Vibrio Species CA Simpson, R Podicheti, DB Rusch, AB Dalia, JC van Kessel MBio 10 (6), 10.1128/mbio. 02788-19, 2019 | 32 | 2019 |
| Transcriptome profiling reveals matrisome alteration as a key feature of ovarian cancer progression S Mitra, K Tiwari, R Podicheti, T Pandhiri, DB Rusch, A Bonetto, C Zhang, ... Cancers 11 (10), 1513, 2019 | 30 | 2019 |
