The last common ancestor of most bilaterian animals possessed at least nine opsins MD Ramirez, AN Pairett, MS Pankey, JM Serb, DI Speiser, AJ Swafford, ... Genome biology and evolution 8 (12), 3640-3652, 2016 | 148 | 2016 |
Eye-independent, light-activated chromatophore expansion (LACE) and expression of phototransduction genes in the skin of Octopus bimaculoides MD Ramirez, TH Oakley Journal of Experimental Biology 218 (10), 1513-1520, 2015 | 140 | 2015 |
Understanding the dermal light sense in the context of integrative photoreceptor cell biology. MD Ramirez, DI Speiser, MS Pankey, TH Oakley Visual neuroscience, 1, 2011 | 78 | 2011 |
Prolific origination of eyes in Cnidaria with co-option of non-visual opsins N Picciani, JR Kerlin, N Sierra, AJM Swafford, MD Ramirez, NG Roberts, ... Current Biology 28 (15), 2413-2419. e4, 2018 | 59 | 2018 |
Temporal analysis of enhancers during mouse cerebellar development reveals dynamic and novel regulatory functions M Ramirez, Y Badayeva, J Yeung, J Wu, A Abdalla-Wyse, E Yang, B Trost, ... Elife 11, e74207, 2022 | 12 | 2022 |
Accelerated clearing and molecular labeling of biological tissues using magnetohydrodynamic force J Dwyer, MD Ramirez, PS Katz, RO Karlstrom, J Bergan Scientific reports 11 (1), 16462, 2021 | 7 | 2021 |
Discovery of transcription factors novel to mouse cerebellar granule cell development through laser-capture microdissection PGY Zhang, J Yeung, I Gupta, M Ramirez, T Ha, DJ Swanson, ... The Cerebellum 17, 308-325, 2018 | 6 | 2018 |
A chromosome-level genome for the nudibranch gastropod Berghia stephanieae helps parse clade-specific gene expression in novel and conserved phenotypes JA Goodheart, RA Rio, NF Taraporevala, RA Fiorenza, SR Barnes, ... BMC biology 22 (1), 9, 2024 | 3 | 2024 |
Implementation of California COVIDNet–a multi-sector collaboration for statewide SARS-CoV-2 genomic surveillance DA Wadford, N Baumrind, EF Baylis, JM Bell, EL Bouchard, M Crumpler, ... Frontiers in Public Health 11, 1249614, 2023 | 3 | 2023 |
The cerebellar gene database: A collective database of genes critical for cerebellar development M Ramirez, J Wu, M Liu, D Wu, D Weeden, D Goldowitz The Cerebellum 21 (4), 606-614, 2022 | 3 | 2022 |
A chromosome-level genome for the nudibranch gastropod Berghia stephanieae helps parse clade-specific gene expression in novel and conserved phenotypes JA Goodheart, RA Rio, NF Taraporevala, RA Fiorenza, SR Barnes, ... bioRxiv, 2023 | 2 | 2023 |
Mapping neuronal gene expression reveals aspects of ganglionic organization in a gastropod mollusc MD Ramirez, TN Bui, PS Katz bioRxiv, 2023.06. 22.546160, 2023 | 2 | 2023 |
The role of non-coding rnas in cerebellar development M Rahimi-Balaei, M Ramirez, I Gupta, D Goldowitz development of the cerebellum from molecular aspects to diseases, 111-128, 2023 | 2 | 2023 |
Genes and cell type specification in cerebellar development J Yeung, M Larouche, M Ramirez, R Robert, D Goldowitz Handbook of the cerebellum and cerebellar disorders, 333-351, 2021 | 2 | 2021 |
Temporal analysis of enhancers during mouse brain development reveals dynamic regulatory function and identifies novel regulators of cerebellar development M Ramirez, Y Badayeva, J Yeung, J Wu, E Yang, FANTOM 5 Consortium, ... bioRxiv, 2021.09. 28.461416, 2021 | 2 | 2021 |
Cellular‐resolution gene expression mapping reveals organization in the head ganglia of the gastropod, Berghia stephanieae MD Ramirez, TN Bui, PS Katz Journal of Comparative Neurology 532 (6), e25628, 2024 | 1 | 2024 |
Identification and characterization of transcribed enhancers during cerebellar development through enhancer RNA analysis M Ramirez, R Robert, J Yeung, J Wu, A Abdalla-Wyse, ... BMC genomics 24 (1), 351, 2023 | 1 | 2023 |
The genome of the soybean gall midge (Resseliella maxima) G Melotto, MW Jones, K Bosley, N Flack, LE Frank, E Jacobson, EJ Kipp, ... G3: Genes, Genomes, Genetics 13 (4), jkad046, 2023 | 1 | 2023 |
Opsins without eyes-precursors or derivatives? TH Oakley, MD Ramirez INTEGRATIVE AND COMPARATIVE BIOLOGY 56, E164-E164, 2016 | 1 | 2016 |
Egg-laying hormone expression in identified neurons across developmental stages and reproductive states of the nudibranch Berghia stephanieae CC Tait, MD Ramirez, PS Katz Hormones and Behavior 164, 105578, 2024 | | 2024 |