| Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB TZ DeSantis, P Hugenholtz, N Larsen, M Rojas, EL Brodie, K Keller, ... Applied and environmental microbiology 72 (7), 5069-5072, 2006 | 11560 | 2006 |
| Structure, function and diversity of the healthy human microbiome nature 486 (7402), 207-214, 2012 | 10053 | 2012 |
| An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea D McDonald, MN Price, J Goodrich, EP Nawrocki, TZ DeSantis, A Probst, ... The ISME journal 6 (3), 610-618, 2012 | 5185 | 2012 |
| PyNAST: a flexible tool for aligning sequences to a template alignment JG Caporaso, K Bittinger, FD Bushman, TZ DeSantis, GL Andersen, ... Bioinformatics 26 (2), 266-267, 2010 | 3807 | 2010 |
| Deciphering the rhizosphere microbiome for disease-suppressive bacteria R Mendes, M Kruijt, I De Bruijn, E Dekkers, M Van Der Voort, ... Science 332 (6033), 1097-1100, 2011 | 2519 | 2011 |
| A framework for human microbiome research Nature 486 (7402), 215-221, 2012 | 2366* | 2012 |
| Deep-sea oil plume enriches indigenous oil-degrading bacteria TC Hazen, EA Dubinsky, TZ DeSantis, GL Andersen, YM Piceno, N Singh, ... Science 330 (6001), 204-208, 2010 | 1375 | 2010 |
| NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes TZ DeSantis, P Hugenholtz, K Keller, EL Brodie, N Larsen, YM Piceno, ... Nucleic acids research 34 (suppl_2), W394-W399, 2006 | 1205 | 2006 |
| Chronic kidney disease alters intestinal microbial flora ND Vaziri, J Wong, M Pahl, YM Piceno, J Yuan, TZ DeSantis, Z Ni, ... Kidney international 83 (2), 308-315, 2013 | 1122 | 2013 |
| Urban aerosols harbor diverse and dynamic bacterial populations EL Brodie, TZ DeSantis, JPM Parker, IX Zubietta, YM Piceno, ... Proceedings of the National Academy of Sciences 104 (1), 299-304, 2007 | 825 | 2007 |
| Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers Z Liu, TZ DeSantis, GL Andersen, R Knight Nucleic acids research 36 (18), e120-e120, 2008 | 651 | 2008 |
| Expansion of urease-and uricase-containing, indole-and p-cresol-forming and contraction of short-chain fatty acid-producing intestinal microbiota in ESRD J Wong, YM Piceno, TZ DeSantis, M Pahl, GL Andersen, ND Vaziri American journal of nephrology 39 (3), 230-237, 2014 | 613 | 2014 |
| High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment TZ DeSantis, EL Brodie, JP Moberg, IX Zubieta, YM Piceno, GL Andersen Microbial ecology 53, 371-383, 2007 | 600 | 2007 |
| Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation EL Brodie, TZ DeSantis, DC Joyner, SM Baek, JT Larsen, GL Andersen, ... Applied and environmental microbiology 72 (9), 6288-6298, 2006 | 559 | 2006 |
| Environmental genomics reveals a single-species ecosystem deep within Earth D Chivian, EL Brodie, EJ Alm, DE Culley, PS Dehal, TZ DeSantis, ... Science 322 (5899), 275-278, 2008 | 526 | 2008 |
| Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patients MJ Cox, M Allgaier, B Taylor, MS Baek, YJ Huang, RA Daly, U Karaoz, ... PloS one 5 (6), e11044, 2010 | 500 | 2010 |
| Long-term sustainability of a high-energy, low-diversity crustal biome LH Lin, PL Wang, D Rumble, J Lippmann-Pipke, E Boice, LM Pratt, ... Science 314 (5798), 479-482, 2006 | 432 | 2006 |
| Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata S Sunagawa, TZ DeSantis, YM Piceno, EL Brodie, MK DeSalvo, ... The ISME journal 3 (5), 512-521, 2009 | 425 | 2009 |
| Selective progressive response of soil microbial community to wild oat roots KM DeAngelis, EL Brodie, TZ DeSantis, GL Andersen, SE Lindow, ... The ISME journal 3 (2), 168-178, 2009 | 388 | 2009 |
| High-density microarray of small-subunit ribosomal DNA probes KH Wilson, WJ Wilson, JL Radosevich, TZ DeSantis, VS Viswanathan, ... Applied and environmental microbiology 68 (5), 2535-2541, 2002 | 383 | 2002 |
