SATO, Yukuto Ph. D.
SATO, Yukuto Ph. D.
Senior Lecturer; Research Laboratory Center, Faculty of Medicine, University of the Ryukyus
Verified email at - Homepage
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MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species
M Miya, Y Sato, T Fukunaga, T Sado, JY Poulsen, K Sato, T Minamoto, ...
Royal Society open science 2 (7), 150088, 2015
Environmental DNA metabarcoding reveals local fish communities in a species-rich coastal sea
S Yamamoto, R Masuda, Y Sato, T Sado, H Araki, M Kondoh, T Minamoto, ...
Scientific reports 7 (1), 40368, 2017
Rare variant discovery by deep whole-genome sequencing of 1,070 Japanese individuals
M Nagasaki, J Yasuda, F Katsuoka, N Nariai, K Kojima, Y Kawai, ...
Nature communications 6 (1), 8018, 2015
MitoFish and MiFish pipeline: a mitochondrial genome database of fish with an analysis pipeline for environmental DNA metabarcoding
Y Sato, M Miya, T Fukunaga, T Sado, W Iwasaki
Molecular biology and evolution 35 (6), 1553-1555, 2018
Environmental DNA enables detection of terrestrial mammals from forest pond water
M Ushio, H Fukuda, T Inoue, K Makoto, O Kishida, K Sato, K Murata, ...
Molecular Ecology Resources 17 (6), e63-e75, 2017
Evolutionary origin of the Scombridae (tunas and mackerels): members of a Paleogene adaptive radiation with 14 other pelagic fish families
M Miya, M Friedman, TP Satoh, H Takeshima, T Sado, W Iwasaki, ...
PloS one 8 (9), e73535, 2013
Rapid genome reshaping by multiple-gene loss after whole-genome duplication in teleost fish suggested by mathematical modeling
J Inoue, Y Sato, R Sinclair, K Tsukamoto, M Nishida
Proceedings of the National Academy of Sciences 112 (48), 14918-14923, 2015
Comparing local‐and regional‐scale estimations of the diversity of stream fish using eDNA metabarcoding and conventional observation methods
H Nakagawa, S Yamamoto, Y Sato, T Sado, T Minamoto, M Miya
Freshwater Biology 63 (6), 569-580, 2018
iJGVD: an integrative Japanese genome variation database based on whole-genome sequencing
Y Yamaguchi-Kabata, N Nariai, Y Kawai, Y Sato, K Kojima, M Tateno, ...
Human genome variation 2 (1), 1-4, 2015
Teleost fish with specific genome duplication as unique models of vertebrate evolution
Y Sato, M Nishida
Environmental Biology of Fishes 88, 169-188, 2010
HLA-VBSeq: accurate HLA typing at full resolution from whole-genome sequencing data
N Nariai, K Kojima, S Saito, T Mimori, Y Sato, Y Kawai, ...
BMC genomics 16, 1-6, 2015
Temporal pattern of loss/persistence of duplicate genes involved in signal transduction and metabolic pathways after teleost-specific genome duplication
Y Sato, Y Hashiguchi, M Nishida
BMC evolutionary biology 9, 1-14, 2009
Inter-individual differences in the oral bacteriome are greater than intra-day fluctuations in individuals
Y Sato, J Yamagishi, R Yamashita, N Shinozaki, B Ye, T Yamada, ...
PloS one 10 (6), e0131607, 2015
Comparison of boiling and robotics automation method in DNA extraction for metagenomic sequencing of human oral microbes
J Yamagishi, Y Sato, N Shinozaki, B Ye, A Tsuboi, M Nagasaki, ...
PLoS One 11 (4), e0154389, 2016
TIGAR2: sensitive and accurate estimation of transcript isoform expression with longer RNA-Seq reads
N Nariai, K Kojima, T Mimori, Y Sato, Y Kawai, Y Yamaguchi-Kabata, ...
BMC genomics 15, 1-9, 2014
Environmental DNA metabarcoding to detect pathogenic Leptospira and associated organisms in leptospirosis-endemic areas of Japan
Y Sato, M Mizuyama, M Sato, T Minamoto, R Kimura, C Toma
Scientific Reports 9 (1), 6575, 2019
iSVP: an integrated structural variant calling pipeline from high-throughput sequencing data
T Mimori, N Nariai, K Kojima, M Takahashi, A Ono, Y Sato, ...
BMC systems biology 7, 1-8, 2013
MitoFish, MitoAnnotator, and MiFish pipeline: updates in 10 years
T Zhu, Y Sato, T Sado, M Miya, W Iwasaki
Molecular Biology and Evolution 40 (3), msad035, 2023
Post-duplication charge evolution of phosphoglucose isomerases in teleost fishes through weak selection on many amino acid sites
Y Sato, M Nishida
BMC Evolutionary Biology 7, 1-10, 2007
Understanding leptospirosis eco-epidemiology by environmental DNA metabarcoding of irrigation water from two agro-ecological regions of Sri Lanka
CD Gamage, Y Sato, R Kimura, T Yamashiro, C Toma
PLoS neglected tropical diseases 14 (7), e0008437, 2020
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