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Ozge Karayel
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Multilevel proteomics reveals host perturbations by SARS-CoV-2 and SARS-CoV
A Stukalov, V Girault, V Grass, O Karayel, V Bergant, C Urban, DA Haas, ...
Nature 594 (7862), 246-252, 2021
5872021
Systematic proteomic analysis of LRRK2-mediated Rab GTPase phosphorylation establishes a connection to ciliogenesis
M Steger, F Diez, HS Dhekne, P Lis, RS Nirujogi, O Karayel, F Tonelli, ...
elife 6, e31012, 2017
3812017
High-throughput and high-sensitivity phosphoproteomics with the EasyPhos platform
SJ Humphrey, O Karayel, DE James, M Mann
Nature protocols 13 (9), 1897-1916, 2018
2692018
Urinary proteome profiling for stratifying patients with familial Parkinson’s disease
S Virreira Winter, O Karayel, MT Strauss, S Padmanabhan, M Surface, ...
EMBO molecular medicine 13 (3), e13257, 2021
952021
Data-independent acquisition method for ubiquitinome analysis reveals regulation of circadian biology
FM Hansen, MC Tanzer, F Brüning, I Bludau, C Stafford, BA Schulman, ...
Nature Communications 12 (1), 254, 2021
862021
The structural context of posttranslational modifications at a proteome-wide scale
I Bludau, S Willems, WF Zeng, MT Strauss, FM Hansen, MC Tanzer, ...
PLoS biology 20 (5), e3001636, 2022
722022
UBL3 modification influences protein sorting to small extracellular vesicles
H Ageta, N Ageta-Ishihara, K Hitachi, O Karayel, T Onouchi, H Yamaguchi, ...
Nature communications 9 (1), 3936, 2018
652018
Rapid and in-depth coverage of the (phospho-) proteome with deep libraries and optimal window design for dia-PASEF
P Skowronek, M Thielert, E Voytik, MC Tanzer, FM Hansen, S Willems, ...
Molecular & Cellular Proteomics 21 (9), 2022
602022
Accurate MS-based Rab10 phosphorylation stoichiometry determination as readout for LRRK2 activity in Parkinson's disease
Ö Karayel, F Tonelli, SV Winter, PE Geyer, Y Fan, EM Sammler, DR Alessi, ...
Molecular & Cellular Proteomics 19 (9), 1546-1560, 2020
602020
Proteome profiling of cerebrospinal fluid reveals biomarker candidates for Parkinson’s disease
O Karayel, SV Winter, S Padmanabhan, YI Kuras, DT Vu, I Tuncali, ...
Cell Reports Medicine 3 (6), 2022
572022
GID E3 ligase supramolecular chelate assembly configures multipronged ubiquitin targeting of an oligomeric metabolic enzyme
D Sherpa, J Chrustowicz, S Qiao, CR Langlois, LA Hehl, ...
Molecular Cell 81 (11), 2445-2459. e13, 2021
462021
Interconversion between anticipatory and active GID E3 ubiquitin ligase conformations via metabolically driven substrate receptor assembly
S Qiao, CR Langlois, J Chrustowicz, D Sherpa, O Karayel, FM Hansen, ...
Molecular cell 77 (1), 150-163. e9, 2020
462020
Systems-level Analysis Reveals Multiple Modulators of Epithelial-mesenchymal Transition and Identifies DNAJB4 and CD81 as Novel Metastasis Inducers in Breast Cancer*[S]
ZCU Kagiali, E Sanal, Ö Karayel, AN Polat, Ö Saatci, PG Ersan, K Trappe, ...
Molecular & Cellular Proteomics 18 (9), 1756-1771, 2019
312019
Integrative proteomics reveals principles of dynamic phosphosignaling networks in human erythropoiesis
Ö Karayel, P Xu, I Bludau, S Velan Bhoopalan, Y Yao, FC Ana Rita, ...
Molecular systems biology 16 (12), e9813, 2020
282020
Linkage-specific ubiquitin chain formation depends on a lysine hydrocarbon ruler
J Liwocha, DT Krist, GJ van der Heden van Noort, FM Hansen, VH Truong, ...
Nature chemical biology 17 (3), 272-279, 2021
262021
MALT1 phosphorylation controls activation of T lymphocytes and survival of ABC-DLBCL tumor cells
T Gehring, T Erdmann, M Rahm, C Graß, A Flatley, TJ O’Neill, S Woods, ...
Cell Reports 29 (4), 873-888. e10, 2019
242019
Temporal resolution of gene derepression and proteome changes upon PROTAC-mediated degradation of BCL11A protein in erythroid cells
S Mehta, A Buyanbat, Y Kai, O Karayel, SR Goldman, D Seruggia, ...
Cell chemical biology 29 (8), 1273-1287. e8, 2022
192022
DIA-based systems biology approach unveils E3 ubiquitin ligase-dependent responses to a metabolic shift
O Karayel, AC Michaelis, M Mann, BA Schulman, CR Langlois
Proceedings of the National Academy of Sciences 117 (51), 32806-32815, 2020
192020
Phosphoproteomic analysis of aurora kinase inhibition in monopolar cytokinesis
AN Polat, O Karayel, SH Giese, B Harmanda, E Sanal, CK Hu, BY Renard, ...
Journal of proteome research 14 (9), 4087-4098, 2015
172015
A20 and ABIN-1 cooperate in balancing CBM complex-triggered NF-κB signaling in activated T cells
H Yin, O Karayel, YY Chao, T Seeholzer, I Hamp, O Plettenburg, ...
Cellular and Molecular Life Sciences 79 (2), 112, 2022
162022
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