Следене
Maxwell W Libbrecht
Maxwell W Libbrecht
Assistant Professor, Computing Science, Simon Fraser University
Потвърден имейл адрес: sfu.ca - Начална страница
Заглавие
Позовавания
Позовавания
Година
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
135492012
Machine learning applications in genetics and genomics
MW Libbrecht, WS Noble
Nature Reviews Genetics, 2015
13642015
A user’s guide to the encyclopedia of DNA elements (ENCODE)
ENCODE Project Consortium
PLoS Biol 9 (4), e1001046, 2011
13282011
Integrative annotation of chromatin elements from ENCODE data
MM Hoffman, J Ernst, SP Wilder, A Kundaje, RS Harris, M Libbrecht, ...
Nucleic acids research 41 (2), 827-841, 2013
5382013
Comparative analysis of metazoan chromatin organization
JWK Ho, YL Jung, T Liu, BH Alver, S Lee, K Ikegami, KA Sohn, A Minoda, ...
Nature 512 (7515), 449-452, 2014
3562014
Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements
A Kundaje, S Kyriazopoulou-Panagiotopoulou, M Libbrecht, CL Smith, ...
Genome research 22 (9), 1735-1747, 2012
1832012
Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell-type-specific expression
MW Libbrecht, F Ay, MM Hoffman, DM Gilbert, JA Bilmes, WS Noble
Genome Research 25, 544-557, 2015
712015
PREDICTD parallel epigenomics data imputation with cloud-based tensor decomposition
TJ Durham, MW Libbrecht, JJ Howbert, J Bilmes, WS Noble
Nature communications 9 (1), 1-15, 2018
472018
Nucleotide sequence and DNaseI sensitivity are predictive of 3D chromatin architecture
J Schreiber, M Libbrecht, J Bilmes, WS Noble
bioRxiv, 103614, 2018
432018
Distinct epigenetic features of differentiation-regulated replication origins
OK Smith, RG Kim, H Fu, MM Martin, CM Lin, K Utani, Y Zhang, AB Marks, ...
Epigenetics & chromatin 9 (1), 1-17, 2016
432016
A unified encyclopedia of human functional DNA elements through fully automated annotation of 164 human cell types
MW Libbrecht, OL Rodriguez, Z Weng, JA Bilmes, MM Hoffman, ...
Genome biology 20 (1), 1-14, 2019
402019
Segway 2.0: Gaussian mixture models and minibatch training
RCW Chan, MW Libbrecht, EG Roberts, JA Bilmes, WS Noble, ...
Bioinformatics 34 (4), 669-671, 2018
332018
Interferometric measurement of the resonant absorption and refractive index in rubidium gas
KG Libbrecht, MW Libbrecht
American journal of physics 74 (12), 1055-1060, 2006
282006
Choosing non‐redundant representative subsets of protein sequence data sets using submodular optimization
MW Libbrecht, JA Bilmes, WS Noble
Proteins: Structure, Function, and Bioinformatics 86 (4), 454-466, 2018
192018
Choosing panels of genomics assays using submodular optimization
K Wei, MW Libbrecht, JA Bilmes, WS Noble
Genome biology 17 (1), 1-15, 2016
142016
Entropic graph-based posterior regularization
M Libbrecht, M Hoffman, J Bilmes, W Noble
International Conference on Machine Learning, 1992-2001, 2015
112015
An interpretable classification method for predicting drug resistance in M. tuberculosis
H Zabeti, N Dexter, AH Safari, N Sedaghat, M Libbrecht, L Chindelevitch
20th International Workshop on Algorithms in Bioinformatics (WABI 2020), 2020
52020
INGOT-DR: an interpretable classifier for predicting drug resistance in M. tuberculosis
H Zabeti, N Dexter, AH Safari, N Sedaghat, M Libbrecht, L Chindelevitch
Algorithms for Molecular Biology 16 (1), 1-12, 2021
42021
Variance-stabilized units for sequencing-based genomic signals
F Bayat, M Libbrecht
bioRxiv, 2020.01. 31.929174, 2020
32020
Continuous chromatin state feature annotation of the human epigenome
B Chen, NS Kenari, MW Libbrecht
bioRxiv, 473017, 2018
32018
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Статии 1–20