| B cells populating the multiple sclerosis brain mature in the draining cervical lymph nodes JNH Stern, G Yaari, JA Vander Heiden, G Church, WF Donahue, ... Science translational medicine 6 (248), 248ra107-248ra107, 2014 | 465 | 2014 |
| pRESTO: a toolkit for processing high-throughput sequencing raw reads of lymphocyte receptor repertoires JA Vander Heiden, G Yaari, M Uduman, JNH Stern, KC O’connor, ... Bioinformatics 30 (13), 1930-1932, 2014 | 441 | 2014 |
| Reprogramming of T cells from human peripheral blood YH Loh, O Hartung, H Li, C Guo, JM Sahalie, PD Manos, A Urbach, ... Cell stem cell 7 (1), 15-19, 2010 | 407 | 2010 |
| High-throughput single cell barcoding GM Church, F Vigneault US Patent 9,902,950, 2018 | 346 | 2018 |
| The effects of somatic hypermutation on neutralization and binding in the PGT121 family of broadly neutralizing HIV antibodies D Sok, U Laserson, J Laserson, Y Liu, F Vigneault, JP Julien, B Briney, ... PLoS pathogens 9 (11), e1003754, 2013 | 249 | 2013 |
| Models of somatic hypermutation targeting and substitution based on synonymous mutations from high-throughput immunoglobulin sequencing data G Yaari, JA Vander Heiden, M Uduman, D Gadala-Maria, N Gupta, ... Frontiers in immunology 4, 358, 2013 | 245 | 2013 |
| Single cell bar-coding for antibody discovery F Vigneault, AW BRIGGS US Patent 9,816,088, 2017 | 243 | 2017 |
| Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers SJ Spencer, MV Tamminen, SP Preheim, MT Guo, AW Briggs, IL Brito, ... The ISME journal 10 (2), 427-436, 2016 | 241 | 2016 |
| Salmonella infection drives promiscuous B cell activation followed by extrafollicular affinity maturation R Di Niro, SJ Lee, JA Vander Heiden, RA Elsner, N Trivedi, JM Bannock, ... Immunity 43 (1), 120-131, 2015 | 219 | 2015 |
| High-resolution antibody dynamics of vaccine-induced immune responses U Laserson, F Vigneault, D Gadala-Maria, G Yaari, M Uduman, ... Proceedings of the National Academy of Sciences 111 (13), 4928-4933, 2014 | 202 | 2014 |
| Systematic identification of edited microRNAs in the human brain S Alon, E Mor, F Vigneault, GM Church, F Locatelli, F Galeano, A Gallo, ... Genome research 22 (8), 1533-1540, 2012 | 199 | 2012 |
| Enzymatic oligonucleotide pre-adenylation GM Church, F Vigneault, M Sismour US Patent App. 12/533,304, 2010 | 167 | 2010 |
| Barcoding bias in high-throughput multiplex sequencing of miRNA S Alon, F Vigneault, S Eminaga, DC Christodoulou, JG Seidman, ... Genome research 21 (9), 1506-1511, 2011 | 158 | 2011 |
| Hierarchical clustering can identify B cell clones with high confidence in Ig repertoire sequencing data NT Gupta, KD Adams, AW Briggs, SC Timberlake, F Vigneault, ... The Journal of Immunology 198 (6), 2489-2499, 2017 | 144 | 2017 |
| Dysregulation of B cell repertoire formation in myasthenia gravis patients revealed through deep sequencing JA Vander Heiden, P Stathopoulos, JQ Zhou, L Chen, TJ Gilbert, ... The Journal of Immunology 198 (4), 1460-1473, 2017 | 114 | 2017 |
| Methods of selecting T cell receptors using affinity oligonucleotide conjugates F Vigneault, AW Briggs, SJ Goldfless, BJ Belmont US Patent 10,393,743, 2019 | 110* | 2019 |
| High-throughput nucleotide library sequencing F Vigneault, AW Briggs, CR Clouser, SJ Goldfless, S Timberlake US Patent 10,590,483, 2020 | 102 | 2020 |
| Efficient microRNA capture and bar-coding via enzymatic oligonucleotide adenylation F Vigneault, AM Sismour, GM Church Nature methods 5 (9), 777-779, 2008 | 95 | 2008 |
| Quantification of microRNA expression with next‐generation sequencing S Eminaga, DC Christodoulou, F Vigneault, GM Church, JG Seidman Current protocols in molecular biology 103 (1), 4.17. 1-4.17. 14, 2013 | 92 | 2013 |
| Single T Cell Sequencing Demonstrates the Functional Role of αβ TCR Pairing in Cell Lineage and Antigen Specificity JA Carter, JB Preall, K Grigaityte, SJ Goldfless, E Jeffery, AW Briggs, ... Frontiers in immunology 10, 1516, 2019 | 90 | 2019 |
