|PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability|
JC Kirby, P Speltz, LV Rasmussen, M Basford, O Gottesman, PL Peissig, ...
Journal of the American Medical Informatics Association 23 (6), 1046-1052, 2016
|Web 2.0-based crowdsourcing for high-quality gold standard development in clinical natural language processing|
H Zhai, T Lingren, L Deleger, Q Li, M Kaiser, L Stoutenborough, I Solti
Journal of medical Internet research 15 (4), e73, 2013
|Large-scale evaluation of automated clinical note de-identification and its impact on information extraction|
L Deleger, K Molnar, G Savova, F Xia, T Lingren, Q Li, K Marsolo, A Jegga, ...
Journal of the American Medical Informatics Association 20 (1), 84-94, 2013
|Desiderata for computable representations of electronic health records-driven phenotype algorithms|
H Mo, WK Thompson, LV Rasmussen, JA Pacheco, G Jiang, R Kiefer, ...
Journal of the American Medical Informatics Association 22 (6), 1220-1230, 2015
|Phenome-wide association study (PheWAS) in EMR-linked pediatric cohorts|
B Namjou, K Marsolo, R Carroll, J Denny, MD Ritchie, T Lingren, ...
Frontiers in genetics 5, 401, 2014
|Evaluating the impact of pre-annotation on annotation speed and potential bias: natural language processing gold standard development for clinical named entity recognition in …|
T Lingren, L Deleger, K Molnar, H Zhai, J Meinzen-Derr, M Kaiser, ...
Journal of the American Medical Informatics Association 21 (3), 406-413, 2013
|Identification of four novel loci in asthma in European American and African American populations|
B Almoguera, L Vazquez, F Mentch, J Connolly, JA Pacheco, ...
American journal of respiratory and critical care medicine 195 (4), 456-463, 2017
|Automated clinical trial eligibility prescreening: increasing the efficiency of patient identification for clinical trials in the emergency department|
Y Ni, S Kennebeck, JW Dexheimer, CM McAneney, H Tang, T Lingren, ...
Journal of the American Medical Informatics Association 22 (1), 166-178, 2014
|Building gold standard corpora for medical natural language processing tasks|
L Deleger, Q Li, T Lingren, M Kaiser, K Molnar
AMIA Annual Symposium Proceedings 2012, 144, 2012
|Phenotyping for patient safety: algorithm development for electronic health record based automated adverse event and medical error detection in neonatal intensive care|
Q Li, K Melton, T Lingren, ES Kirkendall, E Hall, H Zhai, Y Ni, M Kaiser, ...
Journal of the American Medical Informatics Association 21 (5), 776-784, 2014
|EMR-linked GWAS study: investigation of variation landscape of loci for body mass index in children|
B Namjou, M Keddache, B Cobb, IA Holm, R Li, NA Crimmins, L Martin, ...
Frontiers in genetics 4, 268, 2013
|Developing and evaluating a machine learning based algorithm to predict the need of pediatric intensive care unit transfer for newly hospitalized children|
H Zhai, P Brady, Q Li, T Lingren, Y Ni, DS Wheeler, I Solti
Resuscitation 85 (8), 1065-1071, 2014
|Increasing the efficiency of trial-patient matching: automated clinical trial eligibility pre-screening for pediatric oncology patients|
Y Ni, J Wright, J Perentesis, T Lingren, L Deleger, M Kaiser, I Kohane, ...
BMC medical informatics and decision making 15 (1), 28, 2015
|Preparing an annotated gold standard corpus to share with extramural investigators for de-identification research|
L Deleger, T Lingren, Y Ni, M Kaiser, L Stoutenborough, K Marsolo, ...
Journal of biomedical informatics 50, 173-183, 2014
|Electronic health record based algorithm to identify patients with autism spectrum disorder|
T Lingren, P Chen, J Bochenek, F Doshi-Velez, P Manning-Courtney, ...
PloS one 11 (7), e0159621, 2016
|Developing and evaluating an automated appendicitis risk stratification algorithm for pediatric patients in the emergency department|
L Deleger, H Brodzinski, H Zhai, Q Li, T Lingren, ES Kirkendall, ...
Journal of the American Medical Informatics Association 20 (e2), e212-e220, 2013
|Mining FDA drug labels for medical conditions|
Q Li, L Deleger, T Lingren, H Zhai, M Kaiser, L Stoutenborough, AG Jegga, ...
BMC medical informatics and decision making 13 (1), 53, 2013
|An end-to-end hybrid algorithm for automated medication discrepancy detection|
Q Li, SA Spooner, M Kaiser, N Lingren, J Robbins, T Lingren, H Tang, ...
BMC medical informatics and decision making 15 (1), 37, 2015
|A sequence labeling approach to link medications and their attributes in clinical notes and clinical trial announcements for information extraction|
Q Li, H Zhai, L Deleger, T Lingren, M Kaiser, L Stoutenborough, I Solti
Journal of the American Medical Informatics Association 20 (5), 915-921, 2012
|A GWAS study on liver function test using eMERGE network participants|
B Namjou, K Marsolo, T Lingren, MD Ritchie, SS Verma, BL Cobb, ...
PloS one 10 (9), e0138677, 2015