Следене
Juan Pablo Arcon
Juan Pablo Arcon
Nostrum Biodiscovery
Потвърден имейл адрес: nostrumbiodiscovery.com
Заглавие
Позовавания
Позовавания
Година
Molecular dynamics in mixed solvents reveals protein–ligand interactions, improves docking, and allows accurate binding free energy predictions
JP Arcon, LA Defelipe, CP Modenutti, ED López, D Alvarez-Garcia, ...
Journal of chemical information and modeling 57 (4), 846-863, 2017
922017
Impact of DNA methylation on 3D genome structure
D Buitrago, M Labrador, JP Arcon, R Lema, O Flores, A Esteve-Codina, ...
Nature Communications 12 (1), 3243, 2021
692021
WATCLUST: a tool for improving the design of drugs based on protein-water interactions
ED Lopez, JP Arcon, DF Gauto, AA Petruk, CP Modenutti, VG Dumas, ...
Bioinformatics 31 (22), 3697-3699, 2015
572015
AutoDock Bias: improving binding mode prediction and virtual screening using known protein–ligand interactions
JP Arcon, CP Modenutti, D Avendaño, ED Lopez, LA Defelipe, ...
Bioinformatics 35 (19), 3836-3838, 2019
522019
Solvents to fragments to drugs: MD applications in drug design
LA Defelipe, JP Arcon, CP Modenutti, MA Marti, AG Turjanski, X Barril
Molecules 23 (12), 3269, 2018
322018
Molecular mechanism of myoglobin autoxidation: insights from computer simulations
JP Arcon, P Rosi, AA Petruk, MA Marti, DA Estrin
The Journal of Physical Chemistry B 119 (5), 1802-1813, 2015
282015
Deciphering the mechanical code of the genome and epigenome
A Basu, DG Bobrovnikov, B Cieza, JP Arcon, Z Qureshi, M Orozco, T Ha
Nature structural & molecular biology 29 (12), 1178-1187, 2022
272022
Cosolvent-based protein pharmacophore for ligand enrichment in virtual screening
JP Arcon, LA Defelipe, ED Lopez, O Burastero, CP Modenutti, X Barril, ...
Journal of Chemical Information and Modeling 59 (8), 3572-3583, 2019
272019
Kinase activation by small conformational changes
ED Lopez, O Burastero, JP Arcon, LA Defelipe, NG Ahn, MA Marti, ...
Journal of chemical information and modeling 60 (2), 821-832, 2019
192019
Sequence-dependent structural properties of B-DNA: what have we learned in 40 years?
G Da Rosa, L Grille, V Calzada, K Ahmad, JP Arcon, F Battistini, G Bayarri, ...
Biophysical Reviews, 1-11, 2021
172021
Biased docking for protein–ligand pose prediction
JP Arcon, AG Turjanski, MA Martí, S Forli
Protein-ligand interactions and drug design, 39-72, 2021
112021
MiOS, an integrated imaging and computational strategy to model gene folding with nucleosome resolution
MV Neguembor, JP Arcon, D Buitrago, R Lema, J Walther, X Garate, ...
Nature structural & molecular biology 29 (10), 1011-1023, 2022
102022
Solvent Sites Improve Docking Performance of Protein–Protein Complexes and Protein–Protein Interface-Targeted Drugs
GF Mayol, LA Defelipe, JP Arcon, AG Turjanski, MA Marti
Journal of Chemical Information and Modeling 62 (15), 3577-3588, 2022
62022
Cosolvent Sites-Based Discovery of Mycobacterium Tuberculosis Protein Kinase G Inhibitors
O Burastero, LA Defelipe, G Gola, NL Tateosian, ED Lopez, CB Martinena, ...
Journal of medicinal chemistry 65 (14), 9691-9705, 2022
52022
Specificity and Reactivity of Mycobacterium tuberculosis Serine/Threonine Kinases PknG and PknB
O Burastero, M Cabrera, ED Lopez, LA Defelipe, JP Arcon, R Durán, ...
Journal of Chemical Information and Modeling 62 (7), 1723-1733, 2022
32022
Determinantes moleculares de la interacción droga-proteína: uso de cosolventes como moléculas de prueba
JP Arcón
2018
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Статии 1–16