Tommi Vatanen

Получаване на мой собствен потребителски профил

Позовавания

	Всички	От 2018
Позовавания	12141	9977
h-индекс	30	28
i10-индекс	41	39

2600

1300

650

1950

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Публичен достъп

Преглед на всички

33 статии

2 статии

налични

неналични

Въз основа на изисквания при финансирането

Съавтори

Curtis HuttenhowerDepartment of Biostatistics, Harvard School of Public HealthПотвърден имейл адрес: hsph.harvard.edu
Aleksandar David KosticAssistant Professor, Harvard Medical School & Joslin Diabetes CenterПотвърден имейл адрес: joslin.harvard.edu
Eric Alan FranzosaSenior Research Scientist / Harvard T. H. Chan School of Public HealthПотвърден имейл адрес: hsph.harvard.edu
Vallo TillmannUniversity of TartuПотвърден имейл адрес: ut.ee
Moran YassourThe Hebrew University of JerusalemПотвърден имейл адрес: mail.huji.ac.il
Tapani RaikoPrincipal research scientist, AppleПотвърден имейл адрес: apple.com
Matej OrešičProfessor of Medical Sciences (Systems Medicine), Örebro University & Turku Bioscience CentreПотвърден имейл адрес: oru.se
kugathasan, sProfessor of Pediatrics and Human Genetics, Marcus Professor of Pediatric GastroenterologyПотвърден имейл адрес: emory.edu
Clary ClishSenior Director, Metabolomics, Broad Institute of MIT and HarvardПотвърден имейл адрес: broadinstitute.org
Outi VaaralaRIA IMED AstraZenecaПотвърден имейл адрес: astrazeneca.com
Paul C BlaineyBroad Institute and MIT, Department of Biological EngineeringПотвърден имейл адрес: broadinstitute.org
Ismo MattilaResearch Scientist, Steno Diabetes CenterПотвърден имейл адрес: steno.dk
Yann LeCunChief AI Scientist at Facebook & Silver Professor at the Courant Institute, New York UniversityПотвърден имейл адрес: cs.nyu.edu
Harri ValpolaAppleПотвърден имейл адрес: apple.com
Timo HonkelaUniversity of HelsinkiПотвърден имейл адрес: helsinki.fi
Eric MalmiResearch Scientist, Google ZürichПотвърден имейл адрес: google.com
Mikael KuuselaCarnegie Mellon UniversityПотвърден имейл адрес: andrew.cmu.edu
Alexandra (Sasha) ZhernakovaProfessor of Human Genome and Exposome, University Medical Centre Groningen, The NetherlandsПотвърден имейл адрес: umcg.nl
Cisca Wijmenga, PhDERC advanced investigator; Professor of Human Genetics, Dept Genetics (MGE), UMCG, Groningen, theПотвърден имейл адрес: umcg.nl
Marc Jan BonderPostdoc & Team-leader, DKFZПотвърден имейл адрес: dkfz.de

Следене

Tommi Vatanen

Associate Professor, University of Helsinki

Потвърден имейл адрес: helsinki.fi - Начална страница

Human microbiome Bioinformatics Machine learning Computational systems biology Bayesian statistics


Заглавие Сортиране по цитати Сортиране по година Сортиране по заглавие	Позовавания Позовавания	Година
Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity A Zhernakova, A Kurilshikov, MJ Bonder, EF Tigchelaar, M Schirmer, ... Science 352 (6285), 565-569, 2016	1503	2016
Temporal development of the gut microbiome in early childhood from the TEDDY study CJ Stewart, NJ Ajami, JL O’Brien, DS Hutchinson, DP Smith, MC Wong, ... Nature 562 (7728), 583-588, 2018	1205	2018
Variation in microbiome LPS immunogenicity contributes to autoimmunity in humans T Vatanen, AD Kostic, E d’Hennezel, H Siljander, EA Franzosa, ... Cell 165 (4), 842-853, 2016	1111	2016
The dynamics of the human infant gut microbiome in development and in progression toward type 1 diabetes AD Kostic, D Gevers, H Siljander, T Vatanen, T Hyötyläinen, ... Cell host & microbe 17 (2), 260-273, 2015	1061	2015
Pushing stochastic gradient towards second-order methods–backpropagation learning with transformations in nonlinearities T Vatanen, T Raiko, H Valpola, Y LeCun International Conference on Neural Information Processing, 442-449, 2013	1048	2013
Gut microbiome structure and metabolic activity in inflammatory bowel disease EA Franzosa, A Sirota-Madi, J Avila-Pacheco, N Fornelos, HJ Haiser, ... Nature microbiology 4 (2), 293-305, 2019	990	2019
Natural history of the infant gut microbiome and impact of antibiotic treatment on bacterial strain diversity and stability M Yassour, T Vatanen, H Siljander, AM Hämäläinen, T Härkönen, ... Science translational medicine 8 (343), 343ra81-343ra81, 2016	800	2016
The effect of host genetics on the gut microbiome MJ Bonder, A Kurilshikov, EF Tigchelaar, Z Mujagic, F Imhann, AV Vila, ... Nature genetics 48 (11), 1407-1412, 2016	646	2016
The human gut microbiome in early-onset type 1 diabetes from the TEDDY study T Vatanen, EA Franzosa, R Schwager, S Tripathi, TD Arthur, K Vehik, ... Nature 562 (7728), 589-594, 2018	581	2018
A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients AB Hall, M Yassour, J Sauk, A Garner, X Jiang, T Arthur, GK Lagoudas, ... Genome medicine 9, 1-12, 2017	417	2017
Structure-based protein function prediction using graph convolutional networks V Gligorijević, PD Renfrew, T Kosciolek, JK Leman, D Berenberg, ... Nature communications 12 (1), 3168, 2021	277	2021
The super-donor phenomenon in fecal microbiota transplantation BC Wilson, T Vatanen, WS Cutfield, JM O'Sullivan Frontiers in cellular and infection microbiology 9, 2, 2019	256	2019
Intestinal virome changes precede autoimmunity in type I diabetes-susceptible children G Zhao, T Vatanen, L Droit, A Park, AD Kostic, TW Poon, H Vlamakis, ... Proceedings of the National Academy of Sciences 114 (30), E6166-E6175, 2017	241	2017
The influence of a short-term gluten-free diet on the human gut microbiome MJ Bonder, EF Tigchelaar, X Cai, G Trynka, MC Cenit, B Hrdlickova, ... Genome medicine 8, 1-11, 2016	235	2016
Dysbiosis, inflammation, and response to treatment: a longitudinal study of pediatric subjects with newly diagnosed inflammatory bowel disease KA Shaw, M Bertha, T Hofmekler, P Chopra, T Vatanen, A Srivatsa, ... Genome medicine 8 (1), 1-13, 2016	233	2016
Increased intestinal microbial diversity following fecal microbiota transplant for active Crohn's disease BP Vaughn, T Vatanen, JR Allegretti, A Bai, RJ Xavier, J Korzenik, ... Inflammatory bowel diseases 22 (9), 2182-2190, 2016	199	2016
Genomic variation and strain-specific functional adaptation in the human gut microbiome during early life T Vatanen, DR Plichta, J Somani, PC Münch, TD Arthur, AB Hall, S Rudolf, ... Nature microbiology 4 (3), 470-479, 2019	165	2019
Experimental design and quantitative analysis of microbial community multiomics H Mallick, S Ma, EA Franzosa, T Vatanen, XC Morgan, C Huttenhower Genome biology 18 (1), 1-16, 2017	146	2017
Elevated rates of horizontal gene transfer in the industrialized human microbiome M Groussin, M Poyet, A Sistiaga, SM Kearney, K Moniz, M Noel, J Hooker, ... Cell 184 (8), 2053-2067. e18, 2021	118	2021
Language Identification of Short Text Segments with N-gram Models. T Vatanen, JJ Väyrynen, S Virpioja LREC, 2010	114	2010

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