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Stephen Baker
Stephen Baker
Verified email at medschl.cam.ac.uk
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Year
Global burden of bacterial antimicrobial resistance in 2019: a systematic analysis
CJL Murray, KS Ikuta, F Sharara, L Swetschinski, GR Aguilar, A Gray, ...
The lancet 399 (10325), 629-655, 2022
100342022
The genome sequence of Schizosaccharomyces pombe
V Wood, R Gwilliam, MA Rajandream, M Lyne, R Lyne, A Stewart, ...
Nature 415 (6874), 871-880, 2002
21392002
Genome sequence of Yersinia pestis, the causative agent of plague
J Parkhill, BW Wren, NR Thomson, RW Titball, MTG Holden, MB Prentice, ...
Nature 413 (6855), 523-527, 2001
15502001
Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18
J Parkhill, G Dougan, KD James, NR Thomson, D Pickard, J Wain, ...
Nature 413 (6858), 848-852, 2001
15262001
Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health
KE Holt, H Wertheim, RN Zadoks, S Baker, CA Whitehouse, D Dance, ...
Proceedings of the National Academy of Sciences 112 (27), E3574-E3581, 2015
12622015
Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica
J Parkhill, M Sebaihia, A Preston, LD Murphy, N Thomson, DE Harris, ...
Nature genetics 35 (1), 32-40, 2003
11992003
The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome
M Sebaihia, BW Wren, P Mullany, NF Fairweather, N Minton, R Stabler, ...
Nature genetics 38 (7), 779-786, 2006
10642006
Rapid pneumococcal evolution in response to clinical interventions
NJ Croucher, SR Harris, C Fraser, MA Quail, J Burton, M Van Der Linden, ...
science 331 (6016), 430-434, 2011
10142011
PUBMED 10761919 REFERENCE 2 (bases 1 to 2184406) AUTHORS Parkhill, J. TITLE Direct Submission JOURNAL Submitted (30-MAR-2000) Submitted on behalf of the Neisseria
J Parkhill, M Achtman, KD James, SD Bentley, C Churcher, SR Klee, ...
Nature 404 (6777), 502-506, 2000
917*2000
Age-related immune response heterogeneity to SARS-CoV-2 vaccine BNT162b2
DA Collier, IATM Ferreira, P Kotagiri, RP Datir, EY Lim, E Touizer, B Meng, ...
Nature 596 (7872), 417-422, 2021
6892021
Combination antifungal therapy for cryptococcal meningitis
JN Day, TTH Chau, M Wolbers, PP Mai, NT Dung, NH Mai, NH Phu, ...
New England Journal of Medicine 368 (14), 1291-1302, 2013
6362013
Screening of healthcare workers for SARS-CoV-2 highlights the role of asymptomatic carriage in COVID-19 transmission
L Rivett, S Sridhar, D Sparkes, M Routledge, NK Jones, S Forrest, ...
elife 9, e58728, 2020
6092020
High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi
KE Holt, J Parkhill, CJ Mazzoni, P Roumagnac, FX Weill, I Goodhead, ...
Nature genetics 40 (8), 987-993, 2008
5832008
Emergence of an Extensively Drug-Resistant Salmonella enterica Serovar Typhi Clone Harboring a Promiscuous Plasmid Encoding Resistance to …
EJ Klemm, S Shakoor, AJ Page, FN Qamar, K Judge, DK Saeed, ...
MBio 9 (1), 10.1128/mbio. 00105-18, 2018
5782018
Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events
VK Wong, S Baker, DJ Pickard, J Parkhill, AJ Page, NA Feasey, ...
Nature genetics 47 (6), 632-639, 2015
4992015
Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study
LW Meredith, WL Hamilton, B Warne, CJ Houldcroft, M Hosmillo, ...
The Lancet infectious diseases 20 (11), 1263-1271, 2020
4592020
Evolutionary history of Salmonella typhi
P Roumagnac, FX Weill, C Dolecek, S Baker, S Brisse, NT Chinh, TAH Le, ...
Science 314 (5803), 1301-1304, 2006
4392006
Salmonella enterica Serovar Typhi and the Pathogenesis of Typhoid Fever
G Dougan, S Baker
Annual review of microbiology 68 (1), 317-336, 2014
3802014
Salmonella chronic carriage: epidemiology, diagnosis, and gallbladder persistence
JS Gunn, JM Marshall, S Baker, S Dongol, RC Charles, ET Ryan
Trends in microbiology 22 (11), 648-655, 2014
3712014
Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe
KE Holt, S Baker, FX Weill, EC Holmes, A Kitchen, J Yu, V Sangal, ...
Nature genetics 44 (9), 1056-1059, 2012
3502012
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