Professor (Associate) - PCCEI (Univ. Montpellier, Inserm, EFS, Univ. Antilles)
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Cited by
Cited by
Optimal COVID-19 epidemic control until vaccine deployment
R Djidjou-Demasse, Y Michalakis, M Choisy, MT Sofonea, S Alizon
MedRxiv, 2020.04. 02.20049189, 2020
Rapid spread of the SARS-CoV-2 Delta variant in some French regions, June 2021
S Alizon, S Haim-Boukobza, V Foulongne, L Verdurme, ...
Eurosurveillance 26 (28), 2100573, 2021
Memory is key in capturing COVID-19 epidemiological dynamics
MT Sofonea, B Reyné, B Elie, R Djidjou-Demasse, C Selinger, ...
Epidemics 35, 100459, 2021
Age-structured non-pharmaceutical interventions for optimal control of COVID-19 epidemic
Q Richard, S Alizon, M Choisy, MT Sofonea, R Djidjou-Demasse
PLoS computational biology 17 (3), e1008776, 2021
From within-host interactions to epidemiological competition: a general model for multiple infections
MT Sofonea, S Alizon, Y Michalakis
Philosophical Transactions of the Royal Society B: Biological Sciences 370 …, 2015
Exposing the diversity of multiple infection patterns
MT Sofonea, S Alizon, Y Michalakis
Journal of Theoretical Biology 419, 278-289, 2017
Detecting rapid spread of SARS-cov-2 variants, france, january 26–february 16, 2021
S Haim-Boukobza, B Roquebert, S Trombert-Paolantoni, E Lecorche, ...
Emerging infectious diseases 27 (5), 1496, 2021
SARS‐CoV‐2 virulence evolution: avirulence theory, immunity and trade‐offs
S Alizon, MT Sofonea
Journal of Evolutionary Biology 34 (12), 1867-1877, 2021
The SARS-CoV-2 B. 1.351 lineage (VOC β) is outgrowing the B. 1.1. 7 lineage (VOC α) in some French regions in April 2021
B Roquebert, S Trombert-Paolantoni, S Haim-Boukobza, E Lecorche, ...
Eurosurveillance 26 (23), 2100447, 2021
Analyzing and Modeling the Spread of SARS-CoV-2 Omicron Lineages BA. 1 and BA. 2, France, September 2021–February 2022
MT Sofonea, B Roquebert, V Foulongne, D Morquin, L Verdurme, ...
Emerging Infectious Diseases 28 (7), 1355, 2022
Small bottleneck size in a highly multipartite virus during a complete infection cycle
R Gallet, F Fabre, G Thébaud, MT Sofonea, A Sicard, S Blanc, ...
Journal of Virology 92 (14), e00139-18, 2018
SARS-CoV-2 viral RNA levels are not'viral load'
Y Michalakis, MT Sofonea, S Alizon, IG Bravo
Trends in microbiology 29 (11), 970-972, 2021
SARS-CoV-2 variants of concern are associated with lower RT-PCR amplification cycles between January and March 2021 in France
B Roquebert, S Haim-Boukobza, S Trombert-Paolantoni, E Lecorche, ...
International Journal of Infectious Diseases 113, 12-14, 2021
Epidemiological and clinical insights from SARS-CoV-2 RT-PCR crossing threshold values, France, January to November 2020
S Alizon, C Selinger, MT Sofonea, S Haim-Boukobza, JM Giannoli, ...
Eurosurveillance 27 (6), 2100406, 2022
Variant‐specific SARS‐CoV‐2 within‐host kinetics
B Elie, B Roquebert, MT Sofonea, S Trombert‐Paolantoni, V Foulongne, ...
Journal of medical virology, 2022
Early phylodynamics analysis of the COVID-19 epidemic in France
G Danesh, B Elie, Y Michalakis, MT Sofonea, A Bal, S Behillil, G Destras, ...
Peer Community Journal 1, 2021
Épidémiologie mathématique et modélisation de la pandémie de Covid-19: enjeux et diversité
R Djidjou-Demasse, C Selinger, MT Sofonea
Revue Francophone Des Laboratoires 2020 (526), 63-69, 2020
European first-year university students accept evolution but lack substantial knowledge about it: a standardized European cross-country assessment
P Kuschmierz, A Beniermann, A Bergmann, R Pinxten, T Aivelo, ...
Evolution: Education and Outreach 14, 1-22, 2021
Evolution Education Questionnaire on Acceptance and Knowledge (EEQ)-Standardised and ready-to-use protocols to measure acceptance of evolution and knowledge about evolution in …
A Beniermann, P Kuschmierz, R Pinxten, T Aivelo, G Bohlin, ...
COST: European cooperation in science & technology, 2021
Emerging dynamics from high-resolution spatial numerical epidemics
O Thomine, S Alizon, C Boennec, M Barthelemy, M Sofonea
Elife 10, e71417, 2021
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