| Risks of and risk factors for COVID-19 disease in people with diabetes: a cohort study of the total population of Scotland SJ McGurnaghan, A Weir, J Bishop, S Kennedy, LAK Blackbourn, ... The lancet diabetes & endocrinology 9 (2), 82-93, 2021 | 325 | 2021 |
| The interrelationships of placental mammals and the limits of phylogenetic inference JE Tarver, M Dos Reis, S Mirarab, RJ Moran, S Parker, JE O’Reilly, ... Genome biology and evolution 8 (2), 330-344, 2016 | 225 | 2016 |
| Bayesian methods outperform parsimony but at the expense of precision in the estimation of phylogeny from discrete morphological data JE O'Reilly, MN Puttick, L Parry, AR Tanner, JE Tarver, J Fleming, ... Biology letters 12 (4), 20160081, 2016 | 206 | 2016 |
| Dating tips for divergence-time estimation JE O’Reilly, M Dos Reis, PCJ Donoghue Trends in Genetics 31 (11), 637-650, 2015 | 147 | 2015 |
| Uncertain-tree: discriminating among competing approaches to the phylogenetic analysis of phenotype data MN Puttick, JE O'Reilly, AR Tanner, JF Fleming, J Clark, L Holloway, ... Proceedings of the Royal Society B: Biological Sciences 284 (1846), 20162290, 2017 | 136 | 2017 |
| Probabilistic methods surpass parsimony when assessing clade support in phylogenetic analyses of discrete morphological data JE O'Reilly, MN Puttick, D Pisani, PCJ Donoghue Palaeontology 61 (1), 105-118, 2018 | 78 | 2018 |
| Disparities in the analysis of morphological disparity T Guillerme, N Cooper, SL Brusatte, KE Davis, AL Jackson, S Gerber, ... Biology letters 16 (7), 20200199, 2020 | 72 | 2020 |
| Probabilistic methods outperform parsimony in the phylogenetic analysis of data simulated without a probabilistic model MN Puttick, JE O'Reilly, D Pisani, PCJ Donoghue Palaeontology 62 (1), 1-17, 2019 | 56 | 2019 |
| Tips and nodes are complementary not competing approaches to the calibration of molecular clocks JE O'Reilly, PCJ Donoghue Biology Letters 12 (4), 20150975, 2016 | 54 | 2016 |
| Public Health Scotland COVID-19 Health Protection Study Group; Scottish Diabetes Research Network Epidemiology Group. Risks of and risk factors for COVID-19 disease in people … SJ McGurnaghan, A Weir, J Bishop, S Kennedy, LAK Blackbourn, ... Lancet Diabetes Endocrinol 9 (2), 82-93, 2021 | 49 | 2021 |
| The efficacy of consensus tree methods for summarizing phylogenetic relationships from a posterior sample of trees estimated from morphological data JE O’Reilly, PCJ Donoghue Systematic biology 67 (2), 354-362, 2018 | 49 | 2018 |
| Empirical realism of simulated data is more important than the model used to generate it: a reply to Goloboff et al. JE O'Reilly, MN Puttick, D Pisani, PCJ Donoghue Palaeontology 61 (4), 631-635, 2018 | 37 | 2018 |
| Divergence-time estimates for hominins provide insight into encephalization and body mass trends in human evolution HP Püschel, OC Bertrand, JE O’reilly, R Bobe, TA Püschel Nature Ecology & Evolution 5 (6), 808-819, 2021 | 34 | 2021 |
| The effect of fossil sampling on the estimation of divergence times with the fossilized birth–death process JE O’Reilly, PCJ Donoghue Systematic biology 69 (1), 124-138, 2020 | 32 | 2020 |
| FossilSim: An r package for simulating fossil occurrence data under mechanistic models of preservation and recovery J Barido‐Sottani, W Pett, JE O’Reilly, RCM Warnock Methods in Ecology and Evolution 10 (6), 835-840, 2019 | 29 | 2019 |
| Parsimony and maximum-likelihood phylogenetic analyses of morphology do not generally integrate uncertainty in inferring evolutionary history: a response to Brown et al. MN Puttick, JE O'Reilly, D Oakley, AR Tanner, JF Fleming, J Clark, ... Proceedings of the Royal Society B: Biological Sciences 284 (1864), 20171636, 2017 | 27 | 2017 |
| The impact of fossil stratigraphic ranges on tip‐calibration, and the accuracy and precision of divergence time estimates HP Püschel, JE O'Reilly, D Pisani, PCJ Donoghue Palaeontology 63 (1), 67-83, 2020 | 23 | 2020 |
| Marked improvements in glycaemic outcomes following insulin pump therapy initiation in people with type 1 diabetes: a nationwide observational study in Scotland A Jeyam, FW Gibb, JA McKnight, B Kennon, JE O’Reilly, TM Caparrotta, ... Diabetologia 64 (6), 1320-1331, 2021 | 22 | 2021 |
| Flash monitor initiation is associated with improvements in HbA1c levels and DKA rates among people with type 1 diabetes in Scotland: a retrospective nationwide observational study A Jeyam, FW Gibb, JA McKnight, JE O’Reilly, TM Caparrotta, A Höhn, ... Diabetologia 65 (1), 159-172, 2022 | 21 | 2022 |
| Time trends in deaths before age 50 years in people with type 1 diabetes: a nationwide analysis from Scotland 2004–2017 JE O’Reilly, LAK Blackbourn, TM Caparrotta, A Jeyam, B Kennon, ... Diabetologia 63 (8), 1626-1636, 2020 | 15 | 2020 |
