SWISS-MODEL: homology modelling of protein structures and complexes A Waterhouse, M Bertoni, S Bienert, G Studer, G Tauriello, R Gumienny, ... Nucleic acids research 46 (W1), W296-W303, 2018 | 9826 | 2018 |
The SWISS-MODEL Repository—new features and functionality S Bienert, A Waterhouse, TAP De Beer, G Tauriello, G Studer, L Bordoli, ... Nucleic acids research 45 (D1), D313-D319, 2017 | 1597 | 2017 |
MorphoGraphX: A platform for quantifying morphogenesis in 4D P Barbier de Reuille, AL Routier-Kierzkowska, D Kierzkowski, GW Bassel, ... elife 4, e05864, 2015 | 454 | 2015 |
ProMod3—A versatile homology modelling toolbox G Studer, G Tauriello, S Bienert, M Biasini, N Johner, T Schwede PLoS computational biology 17 (1), e1008667, 2021 | 185 | 2021 |
Antagonistic growth regulation by Dpp and Fat drives uniform cell proliferation G Schwank, G Tauriello, R Yagi, E Kranz, P Koumoutsakos, K Basler Developmental cell 20 (1), 123-130, 2011 | 78 | 2011 |
Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods X Robin, J Haas, R Gumienny, A Smolinski, G Tauriello, T Schwede Proteins: Structure, Function, and Bioinformatics 89 (12), 1977-1986, 2021 | 54 | 2021 |
SEM++: A particle model of cellular growth, signaling and migration F Milde, G Tauriello, H Haberkern, P Koumoutsakos Computational Particle Mechanics 1, 211-227, 2014 | 45 | 2014 |
Variability and constancy in cellular growth of Arabidopsis sepals G Tauriello, HM Meyer, RS Smith, P Koumoutsakos, AHK Roeder Plant physiology 169 (4), 2342-2358, 2015 | 41 | 2015 |
Fusing heterogeneous data for the calibration of molecular dynamics force fields using hierarchical Bayesian models S Wu, P Angelikopoulos, G Tauriello, C Papadimitriou, P Koumoutsakos The Journal of chemical physics 145 (24), 2016 | 37 | 2016 |
Introducing “best single template” models as reference baseline for the Continuous Automated Model Evaluation (CAMEO) J Haas, R Gumienny, A Barbato, F Ackermann, G Tauriello, M Bertoni, ... Proteins: Structure, Function, and Bioinformatics 87 (12), 1378-1387, 2019 | 34 | 2019 |
A comprehensive mapping of the druggable cavities within the SARS-CoV-2 therapeutically relevant proteins by combining pocket and docking searches as implemented in pockets 2.0 S Gervasoni, G Vistoli, C Talarico, C Manelfi, AR Beccari, G Studer, ... International journal of molecular sciences 21 (14), 5152, 2020 | 33 | 2020 |
Global genomic analysis of SARS-CoV-2 RNA dependent RNA polymerase evolution and antiviral drug resistance A Mari, T Roloff, M Stange, KK Søgaard, E Asllanaj, G Tauriello, ... Microorganisms 9 (5), 1094, 2021 | 29* | 2021 |
Uncovering new families and folds in the natural protein universe J Durairaj, AM Waterhouse, T Mets, T Brodiazhenko, M Abdullah, ... Nature 622 (7983), 646-653, 2023 | 22 | 2023 |
Modeling of protein tertiary and quaternary structures based on evolutionary information G Studer, G Tauriello, S Bienert, AM Waterhouse, M Bertoni, L Bordoli, ... Computational Methods in Protein Evolution, 301-316, 2019 | 21 | 2019 |
Particle simulations of morphogenesis P Koumoutsakos, B Bayati, F Milde, G Tauriello Mathematical Models and Methods in Applied Sciences 21 (supp01), 955-1006, 2011 | 20 | 2011 |
3D-Beacons: decreasing the gap between protein sequences and structures through a federated network of protein structure data resources M Varadi, S Nair, I Sillitoe, G Tauriello, S Anyango, S Bienert, C Borges, ... GigaScience 11, giac118, 2022 | 11 | 2022 |
ModelCIF: An extension of PDBx/mmCIF data representation for computed structure models B Vallat, G Tauriello, S Bienert, J Haas, BM Webb, A Žídek, W Zheng, ... Journal of molecular biology 435 (14), 168021, 2023 | 10 | 2023 |
Coupling remeshed particle and phase field methods for the simulation of reaction-diffusion on the surface and the interior of deforming geometries G Tauriello, P Koumoutsakos SIAM Journal on Scientific Computing 35 (6), B1285-B1303, 2013 | 8 | 2013 |
Assessment of the assessment—All about complexes G Studer, G Tauriello, T Schwede Proteins: Structure, Function, and Bioinformatics 91 (12), 1850-1860, 2023 | 6 | 2023 |
Discriminating physiological from non‐physiological interfaces in structures of protein complexes: A community‐wide study H Schweke, Q Xu, G Tauriello, L Pantolini, T Schwede, F Cazals, ... Proteomics 23 (17), 2200323, 2023 | 5 | 2023 |