Samuel Alizon

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Mircea T. SOFONEAProfessor (Associate) - PCCEI (Univ. Montpellier, Inserm, EFS, Univ. Antilles)Verified email at normalesup.org
Carmen Lia MurallMcGill UniversityVerified email at mcgill.ca
Nicole MideoUniversity of TorontoVerified email at utoronto.ca
Sebastian BonhoefferTheoretical Biology, ETH ZurichVerified email at env.ethz.ch
Matthew HartfieldNERC Independent Research Fellow, The University of EdinburghVerified email at ed.ac.uk
Christophe FraserPandemic Sciences Institute, Nuffield Department of Medicine, University of OxfordVerified email at bdi.ox.ac.uk
Jacobus (Jaap) de RoodeProfessor of Biology, Emory UniversityVerified email at emory.edu
Amy HurfordBiology Department, Memorial University of NewfoundlandVerified email at mun.ca
Fabio LucianiAssociate Professor, University of New South Wales, Sydney, AustraliaVerified email at unsw.edu.au
Roger D. KouyosUniversity of Zurich; University Hospital ZurichVerified email at uzh.ch
Mathieu Moslonka-LefebvreINRA, UR MaIAGE; University of Cambridge, Dpt of Plant Sciences; AgroParisTechVerified email at moslonkalefebvre.com
Roland RegoesETH ZurichVerified email at env.ethz.ch
Huldrych F. GünthardProfessor for Infectious Diseases, University Hospital ZurichVerified email at usz.ch
Katrina LythgoeUniversity of OxfordVerified email at bdi.ox.ac.uk
Carsten MagnusF. Hoffmann-La RocheVerified email at roche.com
Tanja StadlerETH ZurichVerified email at env.ethz.ch
Viktor von WylEpidemiology, Biostatistics & Prevention Institute; University of ZurichVerified email at uzh.ch
Romain GalletChargé de recherche - INRAEVerified email at inrae.fr
Michal KuceraProfessor of Micropalaeontology, MARUM, University of BremenVerified email at marum.de
Vincent A. A. JansenRoyal Holloway University of LondonVerified email at rhul.ac.uk

Samuel Alizon

Directeur de Recherche, CNRS, CIRB, Paris

Verified email at ird.fr - Homepage

Evolution Virulence Multiple Infections Theoretical Biology Evolutionary Epidemiology


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Virulence evolution and the trade‐off hypothesis: history, current state of affairs and the future S Alizon, A Hurford, N Mideo, M Van Baalen Journal of evolutionary biology 22 (2), 245-259, 2009	869	2009
Inclusive fitness theory and eusociality P Abbot, J Abe, J Alcock, S Alizon, JAC Alpedrinha, M Andersson, ... Nature 471 (7339), E1-E4, 2011	526	2011
Multiple infections and the evolution of virulence S Alizon, JC De Roode, Y Michalakis Ecology letters 16 (4), 556-567, 2013	398	2013
Linking within-and between-host dynamics in the evolutionary epidemiology of infectious diseases N Mideo, S Alizon, T Day Trends in ecology & evolution 23 (9), 511-517, 2008	347	2008
Virulence and pathogenesis of HIV-1 infection: an evolutionary perspective C Fraser, K Lythgoe, GE Leventhal, G Shirreff, TD Hollingsworth, S Alizon, ... Science 343 (6177), 1243727, 2014	270	2014
What is a pathogen? Toward a process view of host-parasite interactions PO Méthot, S Alizon Virulence 5 (8), 775-785, 2014	158	2014
Multiple infections, immune dynamics, and the evolution of virulence S Alizon, M van Baalen The American Naturalist 172 (4), E150-E168, 2008	158	2008
The virulence–transmission trade-off in vector-borne plant viruses: a review of (non-) existing studies R Froissart, J Doumayrou, F Vuillaume, S Alizon, Y Michalakis Philosophical Transactions of the Royal Society B: Biological Sciences 365 …, 2010	156	2010
Emergence of a convex trade-off between transmission and virulence S Alizon, M van Baalen The American Naturalist 165 (6), E155-E167, 2005	147	2005
Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load S Alizon, V Von Wyl, T Stadler, RD Kouyos, S Yerly, B Hirschel, J Böni, ... PLoS pathogens 6 (9), e1001123, 2010	139	2010
Within-host and between-host evolutionary rates across the HIV-1 genome S Alizon, C Fraser Retrovirology 10, 1-10, 2013	136	2013
Empty sites can promote altruistic behavior S Alizon, P Taylor Evolution 62 (6), 1335-1344, 2008	125	2008
Adaptive virulence evolution: the good old fitness-based approach S Alizon, Y Michalakis Trends in ecology & evolution 30 (5), 248-254, 2015	116	2015
Epidemiological and clinical consequences of within-host evolution S Alizon, F Luciani, RR Regoes Trends in microbiology 19 (1), 24-32, 2011	111	2011
Rapid spread of the SARS-CoV-2 Delta variant in some French regions, June 2021 S Alizon, S Haim-Boukobza, V Foulongne, L Verdurme, ... Eurosurveillance 26 (28), 2100573, 2021	105	2021
Optimal COVID-19 epidemic control until vaccine deployment R Djidjou-Demasse, Y Michalakis, M Choisy, MT Sofonea, S Alizon MedRxiv, 2020.04. 02.20049189, 2020	103	2020
Modelling the course of an HIV infection: insights from ecology and evolution S Alizon, C Magnus Viruses 4 (10), 1984-2013, 2012	95	2012
Co-infection and super-infection models in evolutionary epidemiology S Alizon Interface focus 3 (6), 20130031, 2013	89	2013
Introducing the outbreak threshold in epidemiology M Hartfield, S Alizon PLoS pathogens 9 (6), e1003277, 2013	87	2013
Transmission-recovery trade-offs to study parasite evolution S Alizon The American Naturalist 172 (3), E113-E121, 2008	73	2008

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