Следене
Juuso Parkkinen
Juuso Parkkinen
Former researcher at Helsinki Institute for Information Technology HIIT, Aalto University
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A transcriptomics data-driven gene space accurately predicts liver cytopathology and drug-induced liver injury
P Kohonen, JA Parkkinen, EL Willighagen, R Ceder, K Wennerberg, ...
Nature communications 8 (1), 15932, 2017
1042017
Probabilistic drug connectivity mapping
JA Parkkinen, S Kaski
BMC bioinformatics 15, 1-10, 2014
432014
A block model suitable for sparse graphs
J Parkkinen, J Sinkkonen, A Gyenge, S Kaski
Proceedings of the 7th International Workshop on Mining and Learning with …, 2009
312009
Searching for functional gene modules with interaction component models
JA Parkkinen, S Kaski
BMC Systems Biology 4, 1-11, 2010
292010
Comprehensive data-driven analysis of the impact of chemoinformatic structure on the genome-wide biological response profiles of cancer cells to 1159 drugs
SA Khan, A Faisal, JP Mpindi, JA Parkkinen, T Kalliokoski, A Poso, ...
BMC bioinformatics 13, 1-15, 2012
252012
Cross-organism toxicogenomics with group factor analysis
T Suvitaival, JA Parkkinen, S Virtanen, S Kaski
Systems Biomedicine 2 (4), 71-80, 2014
92014
A simple infinite topic mixture for rich graphs and relational data
J Sinkkonen, J Parkkinen, J Aukia, S Kaski
NIPS workshop on analyzing graphs: theory and applications, 2008
82008
Graph visualization with latent variable models
J Parkkinen, K Nybo, J Peltonen, S Kaski
Proceedings of the Eighth Workshop on Mining and Learning with Graphs, 94-101, 2010
62010
A transcriptomics data-driven gene space accurately predicts liver cytopathology and drug-induced liver injury. Nat Commun 8: 15932. http s
P Kohonen, JA Parkkinen, EL Willighagen
doi. org/10.1038/ncomm s1593 2, 2017
52017
Retrieval and analysis of open geospatial data from Finland with the geofi R package. R package version 1.0. 00002
M Kainu, J Lehtomäki, J Parkkinen, J Miettinen, P Kantanen, L Lahti
5
Infopreneur-From Nomads to Knowmads
P Amin, H Heikkilä, T Hyvämäki, A Korolyk, J Parkkinen, Z Zhang, ...
Bit Bang 3. Entrepreneurship and Services, 8-31, 2011
42011
In vitro toxicogenomics for toxicity prediction
R GRAFSTRÖM, P Kohonen, J PARKKINEN, S Kaski
12015
PhD Thesis: Probabilistic components of molecular interactions and drug responses
J Parkkinen
Aalto University, 2014
12014
Probabilistic toxicogenomics studies in vitro
J Parkkinen, R Ceder, E Willighagen, K Wennerberg, S Kaski, ...
Toxicology Letters 211, S195, 2012
12012
In vitro toxicogenomics for toxicity prediction using probabilistic component modeling and a compound-induced transcriptional response pattern
R Grafstrom, P Kohonen, J Parkkinen, S Kaski
US Patent 10,665,323, 2020
2020
24 ICMg. links. sampler
J Parkkinen
Functional Network Analysis, 22, 2016
2016
ICMg. get. comp. memberships 23
J Parkkinen
Functional Network Analysis, 21, 2016
2016
Package ‘sorvi’
L Lahti, J Parkkinen, J Lehtomaki, J Haapanen, J Paananen, E Happonen, ...
2015
Leo Lahti1, 2, Olli-Pekka Huovilainen1, António Gusmao1 and Juuso Parkkinen1 (1) Dpt. Information and Computer Science, Aalto University, Finland (2) Wageningen University …
A Gusmao, J Parkkinen
2014
Leo Lahti1, 2, Olli-Pekka Huovilainen1, António Gusmao1 and Juuso Parkkinen1 (1) Dpt. Information and Computer Science, Aalto University, Finland (2) Wageningen University …
A Gusmao, J Parkkinen
2014
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Статии 1–20