Jeremy J Yang

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Cristian BologaResearch Professor, University of New MexicoVerified email at salud.unm.edu
Tudor OpreaCEO, Expert Systems IncVerified email at expertsystems.inc
Oleg UrsuVertex PharmaceuticalsVerified email at vrtx.com
Stephen L MathiasSr Research Scientist, University of New Mexico Translational Informatics DivisionVerified email at swcp.com
Ðắc-Trung Nguyễnnational center for advancing translational sciencesVerified email at mail.nih.gov
Stephan SchürerUniversity of MiamiVerified email at med.miami.edu
Giovanni BocciSenior Discovery Data Scientist, ExscientiaVerified email at exscientia.co.uk
Lars Juhl JensenUniversity of CopenhagenVerified email at cpr.ku.dk
David J. WildProfessor of Informatics, Indiana UniversityVerified email at indiana.edu
Timothy SheilsVerified email at nih.gov
Noel SouthallAstraZenecaVerified email at astrazeneca.com
Ying DingBill & Lewis Suit Professor, School of Information, Dell Med, University of Texas at AustinVerified email at austin.utexas.edu
Ewy MatheDirector of Informatics, National Center for Advancing Translational SciencesVerified email at nih.gov
Liliana Ostopovici-HalipThe Institute of Chemistry, TimisoaraVerified email at acad-icht.tm.edu.ro
Sorin AvramInstitute of Chemistry Timisoara of Romanian Academy, Department of Computational ChemistryVerified email at acad-icht.tm.edu.ro
Suman SirimullaExpert Systems, IncVerified email at expertsystems.inc
Ramona CurpanResearcher, Coriolan Dragulescu Institute of ChemistryVerified email at acad-icht.tm.edu.ro
Christopher LipinskiScientific Advisor Melior DiscoveryVerified email at meliordiscovery.com
Stuart J. NelsonClinical Professor, George Washington UniversityVerified email at gwu.edu
Rajarshi GuhaVertex PharmaceuticalsVerified email at vrtx.com

Jeremy J Yang

University of New Mexico

Verified email at salud.unm.edu - Homepage

Cheminformatics Bioinformatics Data Science


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
The origin of intermediary metabolism HJ Morowitz, JD Kostelnik, J Yang, GD Cody Proceedings of the National Academy of Sciences 97 (14), 7704-7708, 2000	396	2000
Unexplored therapeutic opportunities in the human genome TI Oprea, CG Bologa, S Brunak, A Campbell, GN Gan, A Gaulton, ... Nature reviews Drug discovery 17 (5), 317-332, 2018	378	2018
DrugCentral: online drug compendium O Ursu, J Holmes, J Knockel, CG Bologa, JJ Yang, SL Mathias, SJ Nelson, ... Nucleic acids research, gkw993, 2016	288	2016
Pharos: collating protein information to shed light on the druggable genome DT Nguyen, S Mathias, C Bologa, S Brunak, N Fernandez, A Gaulton, ... Nucleic acids research 45 (D1), D995-D1002, 2017	264	2017
DrugCentral 2021 supports drug discovery and repositioning S Avram, CG Bologa, J Holmes, G Bocci, TB Wilson, DT Nguyen, ... Nucleic acids research 49 (D1), D1160-D1169, 2021	161	2021
Stigmata: An algorithm to determine structural commonalities in diverse datasets NE Shemetulskis, D Weininger, CJ Blankley, JJ Yang, C Humblet Journal of chemical information and computer sciences 36 (4), 862-871, 1996	139	1996
DrugCentral 2018: an update O Ursu, J Holmes, CG Bologa, JJ Yang, SL Mathias, V Stathias, ... Nucleic acids research 47 (D1), D963-D970, 2019	134	2019
TCRD and Pharos 2021: mining the human proteome for disease biology TK Sheils, SL Mathias, KJ Kelleher, VB Siramshetty, DT Nguyen, ... Nucleic Acids Research 49 (D1), D1334-D1346, 2021	128	2021
Associating drugs, targets and clinical outcomes into an integrated network affords a new platform for computer‐aided drug repurposing TI Oprea, SK Nielsen, O Ursu, JJ Yang, O Taboureau, SL Mathias, ... Molecular informatics 30 (2‐3), 100-111, 2011	126	2011
Badapple: promiscuity patterns from noisy evidence JJ Yang, O Ursu, CA Lipinski, LA Sklar, TI Oprea, CG Bologa Journal of cheminformatics 8, 1-14, 2016	96	2016
Analysis and hit filtering of a very large library of compounds screened against Mycobacterium tuberculosis S Ekins, T Kaneko, CA Lipinski, J Bradford, K Dole, A Spektor, K Gregory, ... Mol. BioSyst. 6 (11), 2316-2324, 2010	82	2010
Structural Simplification of Bioactive Natural Products with Multicomponent Synthesis. 3. Fused Uracil-Containing Heterocycles as Novel Topoisomerase-Targeting Agents NM Evdokimov, S Van Slambrouck, P Heffeter, L Tu, B Le Calvé, ... Journal of Medicinal Chemistry, 2011	79	2011
Drug target ontology to classify and integrate drug discovery data Y Lin, S Mehta, H Küçük-McGinty, JP Turner, D Vidovic, M Forlin, A Koleti, ... Journal of biomedical semantics 8, 1-16, 2017	76	2017
edge2vec: Representation learning using edge semantics for biomedical knowledge discovery Z Gao, G Fu, C Ouyang, S Tsutsui, X Liu, J Yang, C Gessner, B Foote, ... BMC bioinformatics 20, 1-15, 2019	64	2019
Targeting for long-term outcomes J Yang, D Eckles, P Dhillon, S Aral Management Science 70 (6), 3841-3855, 2024	63	2024
A machine learning platform to estimate anti-SARS-CoV-2 activities GB Kc, G Bocci, S Verma, MM Hassan, J Holmes, JJ Yang, S Sirimulla, ... Nature Machine Intelligence 3 (6), 527-535, 2021	60	2021
Pharos 2023: an integrated resource for the understudied human proteome KJ Kelleher, TK Sheils, SL Mathias, JJ Yang, VT Metzger, VB Siramshetty, ... Nucleic acids research 51 (D1), D1405-D1416, 2023	36	2023
How to illuminate the druggable genome using pharos T Sheils, SL Mathias, VB Siramshetty, G Bocci, CG Bologa, JJ Yang, ... Current protocols in bioinformatics 69 (1), e92, 2020	36	2020
The CARLSBAD database: a confederated database of chemical bioactivities SL Mathias, J Hines-Kay, JJ Yang, G Zahoransky-Kohalmi, CG Bologa, ... Database 2013, bat044, 2013	35	2013
TIN-X: target importance and novelty explorer DC Cannon, JJ Yang, SL Mathias, O Ursu, S Mani, A Waller, SC Schürer, ... Bioinformatics 33 (16), 2601-2603, 2017	31	2017

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