Wim Vranken
Wim Vranken
Research professor, Vrije Universiteit Brussel, Belgium
Verified email at - Homepage
Cited by
Cited by
The CCPN data model for NMR spectroscopy: development of a software pipeline
WF Vranken, W Boucher, TJ Stevens, RH Fogh, A Pajon, M Llinas, ...
Proteins: structure, function, and bioinformatics 59 (4), 687-696, 2005
ACPYPE-Antechamber python parser interface
AW Sousa da Silva, WF Vranken
BMC research notes 5 (1), 1-8, 2012
RECOORD: a recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank
AJ Nederveen, JF Doreleijers, W Vranken, Z Miller, CAEM Spronk, ...
PROTEINS: Structure, Function, and Bioinformatics 59 (4), 662-672, 2005
Determination of secondary structure populations in disordered states of proteins using nuclear magnetic resonance chemical shifts
C Camilloni, A De Simone, WF Vranken, M Vendruscolo
Biochemistry 51 (11), 2224-2231, 2012
DisProt 7.0: a major update of the database of disordered proteins
D Piovesan, F Tabaro, I Mičetić, M Necci, F Quaglia, CJ Oldfield, ...
Nucleic acids research 45 (D1), D219-D227, 2017
PDBe: protein data bank in Europe
S Velankar, Y Alhroub, A Alili, C Best, HC Boutselakis, S Caboche, ...
Nucleic acids research 39 (suppl_1), D402-D410, 2010
Determination of the three-dimensional solution structure of Raphanus sativus antifungal protein 1 by 1H NMR
F Fant, W Vranken, W Broekaert, F Borremans
Journal of molecular biology 279 (1), 257-270, 1998
WeNMR: structural biology on the grid
TA Wassenaar, M Van Dijk, N Loureiro-Ferreira, G Van Der Schot, ...
Journal of Grid Computing 10 (4), 743-767, 2012
MobiDB 3.0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins
D Piovesan, F Tabaro, L Paladin, M Necci, I Mičetić, C Camilloni, N Davey, ...
Nucleic acids research 46 (D1), D471-D476, 2018
DisProt: intrinsic protein disorder annotation in 2020
A Hatos, B Hajdu-Soltész, AM Monzon, N Palopoli, L Álvarez, ...
Nucleic acids research 48 (D1), D269-D276, 2020
Remediation of the protein data bank archive
K Henrick, Z Feng, WF Bluhm, D Dimitropoulos, JF Doreleijers, S Dutta, ...
Nucleic acids research 36 (suppl_1), D426-D433, 2007
Recommendations of the wwPDB NMR validation task force
GT Montelione, M Nilges, A Bax, P Güntert, T Herrmann, JS Richardson, ...
Structure 21 (9), 1563-1570, 2013
From protein sequence to dynamics and disorder with DynaMine
E Cilia, R Pancsa, P Tompa, T Lenaerts, WF Vranken
Nature communications 4 (1), 1-10, 2013
E-MSD: the European bioinformatics institute macromolecular structure database
H Boutselakis, D Dimitropoulos, J Fillon, A Golovin, K Henrick, A Hussain, ...
Nucleic acids research 31 (1), 458-462, 2003
CING: an integrated residue-based structure validation program suite
JF Doreleijers, AW Sousa da Silva, E Krieger, SB Nabuurs, CAEM Spronk, ...
Journal of biomolecular NMR 54 (3), 267-283, 2012
The CCPN project: an interim report on a data model for the NMR community
R Fogh, J Ionides, E Ulrich, W Boucher, W Vranken, JP Linge, M Habeck, ...
nature structural biology 9 (6), 416-418, 2002
EUROCarbDB: an open-access platform for glycoinformatics
CW Von Der Lieth, AA Freire, D Blank, MP Campbell, A Ceroni, ...
Glycobiology 21 (4), 493-502, 2011
The DynaMine webserver: predicting protein dynamics from sequence
E Cilia, R Pancsa, P Tompa, T Lenaerts, WF Vranken
Nucleic acids research 42 (W1), W264-W270, 2014
DRESS: a database of REfined solution NMR structures
SB Nabuurs, AJ Nederveen, W Vranken, JF Doreleijers, AMJJ Bonvin, ...
PROTEINS: Structure, Function, and Bioinformatics 55 (3), 483-486, 2004
Accurate random coil chemical shifts from an analysis of loop regions in native states of proteins
A De Simone, A Cavalli, STD Hsu, W Vranken, M Vendruscolo
Journal of the American Chemical Society 131 (45), 16332-16333, 2009
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