Следене
Ilias Patmanidis
Ilias Patmanidis
Потвърден имейл адрес: uni-oldenburg.de
Заглавие
Позовавания
Позовавания
Година
Martini 3: a general purpose force field for coarse-grained molecular dynamics
PCT Souza, R Alessandri, J Barnoud, S Thallmair, I Faustino, ...
Nature methods 18 (4), 382-388, 2021
6382021
Molecular simulations of self-assembling bio-inspired supramolecular systems and their connection to experiments
PWJM Frederix, I Patmanidis, SJ Marrink
Chemical Society Reviews 47 (10), 3470-3489, 2018
1432018
Martini 3 coarse‐grained force field: small molecules
R Alessandri, J Barnoud, AS Gertsen, I Patmanidis, AH de Vries, ...
Advanced Theory and Simulations 5 (1), 2100391, 2022
832022
Targeted cutaneous delivery of ciclosporin A using micellar nanocarriers and the possible role of inter-cluster regions as molecular transport pathways
M Lapteva, V Santer, K Mondon, I Patmanidis, G Chiriano, L Scapozza, ...
Journal of controlled release 196, 9-18, 2014
742014
Using small-angle scattering and contrast matching to understand molecular packing in low molecular weight gels
ER Draper, B Dietrich, K McAulay, C Brasnett, H Abdizadeh, I Patmanidis, ...
Matter 2 (3), 764-778, 2020
612020
Fluorinated alcohols’ effects on lipid bilayer properties
M Zhang, T Peyear, I Patmanidis, DV Greathouse, SJ Marrink, ...
Biophysical Journal 115 (4), 679-689, 2018
302018
Multiscale modeling of molecular structure and optical properties of complex supramolecular aggregates
AS Bondarenko, I Patmanidis, R Alessandri, PCT Souza, TLC Jansen, ...
Chemical Science 11 (42), 11514-11524, 2020
242020
Structural characterization of supramolecular hollow nanotubes with atomistic simulations and SAXS
I Patmanidis, AH de Vries, TA Wassenaar, W Wang, G Portale, SJ Marrink
Physical Chemistry Chemical Physics 22 (37), 21083-21093, 2020
192020
Molecular versus excitonic disorder in individual artificial light-harvesting systems
B Kriete, AS Bondarenko, R Alessandri, I Patmanidis, VV Krasnikov, ...
Journal of the American Chemical Society 142 (42), 18073-18085, 2020
142020
As good as it gets? Folding molecular dynamics simulations of the LytA choline-binding peptide result to an exceptionally accurate model of the peptide structure
I Patmanidis, NM Glykos
Journal of Molecular Graphics and Modelling 41, 68-71, 2013
132013
Pragmatic coarse-graining of proteins: models and applications
L Borges-Araújo, I Patmanidis, AP Singh, LHS Santos, AK Sieradzan, ...
Journal of Chemical Theory and Computation 19 (20), 7112-7135, 2023
82023
Modelling structural properties of cyanine dye nanotubes at coarse-grained level
I Patmanidis, PCT Souza, S Sami, RWA Havenith, AH de Vries, ...
Nanoscale advances 4 (14), 3033-3042, 2022
52022
Cryogenic TEM imaging of artificial light harvesting complexes outside equilibrium
SR Krishnaswamy, IA Gabrovski, I Patmanidis, MCA Stuart, AH de Vries, ...
Scientific Reports 12 (1), 5552, 2022
42022
Comparing dimerization free energies and binding modes of small aromatic molecules with different force fields
I Patmanidis, R Alessandri, AH de Vries, SJ Marrink
Molecules 26 (19), 6069, 2021
32021
Watching molecular nanotubes self-assemble in real time
M Manrho, SR Krishnaswamy, B Kriete, I Patmanidis, AH de Vries, ...
Journal of the American Chemical Society 145 (41), 22494-22503, 2023
12023
Higher temperatures worsen the effects of mutations on protein stability
DG Kontopoulos, I Patmanidis, TG Barraclough, S Pawar
bioRxiv, 2020.10. 13.337972, 2020
12020
Electronic Supplementary Information (ESI) for Modelling structural properties of cyanine dye nanotubes at coarse-grained level
I Patmanidis, PCT Souza, S Sami, R WA
Supporting information for: Martini 3 Coarse-Grained Force Field: Small Molecules
R Alessandri, J Barnoud, AS Gertsen, I Patmanidis, AH de Vries, ...
Системата не може да изпълни операцията сега. Опитайте отново по-късно.
Статии 1–18